Gene Rmar_1357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1357 
Symbol 
ID8568007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1589997 
End bp1591133 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content63% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003290634 
Protein GI268316915 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCGGC TCCGGTTTTA TGGCCTGTTG CTGCTGCTGG CCGTAGCGCC GGCCCTGAAG 
GCGCAGCGGG CACCGCGGTA CGCGGTAGCG CCGGTTTCTC CGCATGCGTC GCTGCTGATA
CAGATCCGGG ACTCCATCGA TGCGCTGATG CGGCGCTACG GGGTGCCTGG GCTTTCAGCA
GCCATCGGTG TGGACGGCGA ACTGCTCTGG GCGGAAGGAT TCGGCTATGC CGACGTGGAA
AACCGGGTCC CCATGCTGCC GCAGACGAAG TTGCGGGTGG CCAGCGTGTC CAAGTCACTG
ACGTCGGCCG CACTGGGACT GCTGGTAGAG CAGGGGAAAC TGGACCTAGA CGCTCCCGTG
CAGCGCTACG TGCCTTCCTT TCCGGAAAAG CGCTGGCCGA TCACGACCCG CCAGCTTGCC
GGACACCTGG CGGGCATCCG CCACTACCGC GATCAGGAAT TCTACAGCAT GAAACACTAC
GATTCGGTGC TGGAGGCTCT GGAAGTCTTC AAAGATGACA CGTTGCTTTT CCGGCCGGGT
ACGCGCTACG CGTACTCCAG TTACGGCTGG AATCTGATCA GCGCGGTGAT CGAGGGAGCC
TCCGACATGC CTTTCCTGCA GTTCATGCGC CGCTATGTGT TCGATCCGCT GGATATGCAC
GACACGGTAG CCGAGCACGT GGACAGCCTG ATCCTGCACC GCGCCCGCTT TTATATCTAC
CGGGACAGTC TGCTGATGAA TGCGCCCTAC GTGGACAACA GCGTCAAGTG GGCCGGCGGC
GGCTTTCTGT CGACGGCGCC GGATCTGGTA CGTTTCGGCA ATGGACTGCT GACCGGACGC
CTGCTGAAGC CTGAGACGGT CCGATTGCTC TTCACCTCGC AACGCACCGA GGACGGGCAG
GAGACCGGCT ATGGGATGGG GTGGCGGGTC GGCGAGCACC TGGGACGCCA TTTCGTCTGG
CACACCGGCG GCGCCGTAGG AGGCAGTTCG GTGCTCGTGC TGCTGCCCGA AGCGAAAGTG
GTTGTCGCCC TGATTGCCAA CCTGCAGGGG GTGCGGCTGG CACCGCTGGG GTTCTGGATC
GCCGATCAGG TAGCCCGGCA CATGGTGGAA GCGGACGCGG CCGTTCCTTC CGATTAA
 
Protein sequence
MYRLRFYGLL LLLAVAPALK AQRAPRYAVA PVSPHASLLI QIRDSIDALM RRYGVPGLSA 
AIGVDGELLW AEGFGYADVE NRVPMLPQTK LRVASVSKSL TSAALGLLVE QGKLDLDAPV
QRYVPSFPEK RWPITTRQLA GHLAGIRHYR DQEFYSMKHY DSVLEALEVF KDDTLLFRPG
TRYAYSSYGW NLISAVIEGA SDMPFLQFMR RYVFDPLDMH DTVAEHVDSL ILHRARFYIY
RDSLLMNAPY VDNSVKWAGG GFLSTAPDLV RFGNGLLTGR LLKPETVRLL FTSQRTEDGQ
ETGYGMGWRV GEHLGRHFVW HTGGAVGGSS VLVLLPEAKV VVALIANLQG VRLAPLGFWI
ADQVARHMVE ADAAVPSD