Gene Rmar_1340 details

Gene Information

• Locus tag: Rmar_1340
• ID: 8567990
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 1567203
• End bp: 1569341
• Gene Length: 2139 bp
• Protein Length: 712 aa
• Translation table: 11
• GC content: 65%
• Product: hypothetical protein
• Protein accession: YP_003290617
• Protein GI: 268316898

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGCAGC TCGCCTGGCC GCCCTTCCTG TACGTTCTTC TGCTGAGCCT GACGGTCGCA 
TTCGCCGTCT GGACCTACCG CCGCACGCAT GCCCTGACCC GACGCCAGCG TCTGCTGCTG 
ACACTGCTCC GGAGCACCAC CCTGGGCCTC GTGCTTACGC TGCTGGCCGA TCCCCTGCTG 
GTACGTACCG AGCGACGGCA GACTCCGCCC GAACTGGCCC TTCTGATCGA CGATAGTGCC 
AGTATGCCGC TGGCCGCCCG CGACAGCAGC CAGCAACTGG CCCAACGCCT GCAACAAACC 
CTCCCGTGGG ATGCGTTGCA AAAGACCCAC CTGCACTCCT ACGGCTTTGG CGCAACGCTC 
TTTCCACTTC CCGAAAAGCC CCGCCTGCTG GCGGATTCGC TTTGGTTTCG ACGTACCCGC 
ACCGACCTGA ATCAGGCCAT TCTCGAAGTC CAGCAACGCC ATCCCCATCT TCGAGCCATC 
GTATTGATCT CCGACGGTCA GTTCAACACC GGTCCGTCAC CCCTGTACAG CGCCGAACGC 
CTGGGCATCC CGATTTTCAC CGTGGCCGTG GGCGATACTG CACGCCCGCG CGACATCTGG 
ATCGACCGTA TCGAAACCAA CACGCTGGCC TACACGCGGA CGCGCCTCCC CGTCACAGCA 
CACCTGCAGG CCCGGGGCTT CGCCGGCGCG GAAGTAACGA TCAGGCTGGA AGTGGACGGC 
CGCGAAATCG AACGCCAGCG ACACACCTTC AGCGCTCAGG AAGAGCGGGC GACCGTCACC 
TTCACCTACG AACCACAGCA GCCGGGTCTG CATCGGCTGC GCGTGTATGT GGATCCGGCT 
GCTGGGGAGT TTCTGGATAG CAATAACGGA GAAAGCGCCG TCGTTCGCGT GCTCGAACGC 
CGCCGCCGCA TCCTGCTGCT CGGCGCCGCC CCCGAACCCG ATCTGGCCAA CCTCCAGCGG 
CTCCTCGCTC AGAACGCCGA CCTGGAGGTA ACCACACGCG TGCAGCGCGA CGACCGACGC 
TTCTACGGCG GTCCGCTTCC AGACTCACTC GAAGCCTTCG ATCTAATCAT CCTGGCCGGC 
TATCCTGGAC GCGAAGCCAG CACGACCGAC CTGGAGCGTA TCGCGGCCGC CGCCGAGCGC 
GTCCCGCTCC TCTTTCTGCT CAGCCCCCAG ACGGATCTCC GTCGCCTGAG CGCCCTGGCC 
GAGGTACTTC CGGCCCGCCC CGATCAGATT CTTCCCGGCT ACGTTGACGT GGCCTTCCAG 
CTTCGCCCGG AAGCTCGCAC GCATGCCGTC TTTGATCTTC CCGGTGGCAT CCCCGACGCA 
CTGGAACAGC TTCCTCCGCT TCGCACCACA CTTTCCACCT GGACGGTGGC CCCGGACGCG 
CGTCTGCTGG CCGTCGCCCG GTCGACCGAC GGCGCCTCCC CTACCCCGTT GCTCGTCGTT 
CAGGAACGGG GCGGGCATCG CCGCGCCGCG CTCCTGGGCA GCGGCACCTG GCGCTGGAGC 
AGCCTGCCCG ATGCGTTCGA CGAGCTGCGA ACCTTCTGGG AGACGCTGCT GAACAATCTG 
ATGCAATGGC TGACCGCGCC GAGCGAAAAC CAGCAGGTGC GCATCCGCCC GGAACGCGAC 
ACGTTTGGCG AAGACGAACC GGTTCGACTC CTGGGCGAAG TGTACGACGA ACGCCTGGCC 
CCCGTCGACG ACGCGACGGT TACCGTCGAC GTGTGGGACG CCGACAGCAC CCGCTATCCG 
TTCCGTATGG AATCGACCGG CAACGGCCGC TATCGCCTGG AAATCGATAA CCTGCCCCAG 
GGCCTCTACC GCTACCGGGG CGAAGCACGG CGCGGAACGG AACTACTCGG CCGCGACAGC 
GGCTACTTTG CCGTCGGTGC CACCACGCTT GAGTACAAAA CCCCCTGGGC CGACTGGAAC 
CTGCTTCGAC AGCTTGCCGG CCGCACCGGT GGACGCTTCC TGACCCTTTC GGAAGCCTCG 
ACGCTGGCAA CGACGCTCCA GCAGGCCGGC TTGCTTACGC CATCGGAGAC GCTCGTACAG 
GCAGAGTGGC GCCCGCGGAT GACGTGGCCG CCGCTTGCGC TGATTATTTT GCTCCTTACG 
ATCGAGTGGG TTCTTCGCAA ACGTTTCGGG GTTGTTTAG 

 

Protein sequence

MLQLAWPPFL YVLLLSLTVA FAVWTYRRTH ALTRRQRLLL TLLRSTTLGL VLTLLADPLL 
VRTERRQTPP ELALLIDDSA SMPLAARDSS QQLAQRLQQT LPWDALQKTH LHSYGFGATL 
FPLPEKPRLL ADSLWFRRTR TDLNQAILEV QQRHPHLRAI VLISDGQFNT GPSPLYSAER 
LGIPIFTVAV GDTARPRDIW IDRIETNTLA YTRTRLPVTA HLQARGFAGA EVTIRLEVDG 
REIERQRHTF SAQEERATVT FTYEPQQPGL HRLRVYVDPA AGEFLDSNNG ESAVVRVLER 
RRRILLLGAA PEPDLANLQR LLAQNADLEV TTRVQRDDRR FYGGPLPDSL EAFDLIILAG 
YPGREASTTD LERIAAAAER VPLLFLLSPQ TDLRRLSALA EVLPARPDQI LPGYVDVAFQ 
LRPEARTHAV FDLPGGIPDA LEQLPPLRTT LSTWTVAPDA RLLAVARSTD GASPTPLLVV 
QERGGHRRAA LLGSGTWRWS SLPDAFDELR TFWETLLNNL MQWLTAPSEN QQVRIRPERD 
TFGEDEPVRL LGEVYDERLA PVDDATVTVD VWDADSTRYP FRMESTGNGR YRLEIDNLPQ 
GLYRYRGEAR RGTELLGRDS GYFAVGATTL EYKTPWADWN LLRQLAGRTG GRFLTLSEAS 
TLATTLQQAG LLTPSETLVQ AEWRPRMTWP PLALIILLLT IEWVLRKRFG VV