Gene Rmar_1339 details

Gene Information

• Locus tag: Rmar_1339
• ID: 8567989
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 1566402
• End bp: 1567190
• Gene Length: 789 bp
• Protein Length: 262 aa
• Translation table: 11
• GC content: 58%
• Product: CMP/dCMP deaminase zinc-binding protein
• Protein accession: YP_003290616
• Protein GI: 268316897

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCCACG ATCCTGCTGT GACGGACGTA CGCGAGCAAC TTCGGAAGCT GGTGCGAGAG 
GTGCGCCATC GGGCCTATGT GCCGTATTCG AAACGTCCGG AAGCCGTGGT GCTGTTGCTT 
TCGGACGGCT CCTGGATTCC GGGGGTGCGC GTCGAAAGCG CGTCGTTTTC GCTGACGATT 
CCACCGCTGC AAAATGCCTG GACGACCGCC GTGGCGCTGG GTCGTCGCGA TGTGGTGGCT 
GTGGTCTTCT CAGAGCCACC AGATGCGGGA ACGCGGGCTT TTTTGGAGGG GCTGGAATTA 
TCGCTAATGG GCGTATCGGC GGATCTTTTT GTGCTTCGAT CTGCTGAGCT GGCGGTACCT 
TGCGAGCCGC TTGCCCCTTT TCTTGATCAG ATGCCCGATG AACCGCCCGA GGGTATTCAA 
CTGGCCCGTG AGGTTGCTAC TCGTGCGCTG GCGCCGTACT CACGGTTTCC GGTGGGTTGT 
CTGCTCCAGC TTGAGGATGG TCGTTGTATT CCGGGCGTCA ACGTCGAGCA TCCGGACTGG 
ACACGAACGC TCTGTGCCGA ACGCAATGCG CTGGGTACGG CCGTTAGCTA CGGAATAGCG 
CCGTCAACCT GGCGAGCGTT GTTTCTGTCG TGTGTGAACG ACGTCCGGGG TACGCCCTGT 
GGTGCCTGTC GACAACTGCT GGCCGAACAC CGTTCGGATC TGTCGGTGTG GATGGATCGA 
GGATCGAAGA ATCCTCCTGA GCATATGAGG GTTGATCTTT TACTTCCTGG TTTTTTTGTA 
TTGCAATAA 

 

Protein sequence

MIHDPAVTDV REQLRKLVRE VRHRAYVPYS KRPEAVVLLL SDGSWIPGVR VESASFSLTI 
PPLQNAWTTA VALGRRDVVA VVFSEPPDAG TRAFLEGLEL SLMGVSADLF VLRSAELAVP 
CEPLAPFLDQ MPDEPPEGIQ LAREVATRAL APYSRFPVGC LLQLEDGRCI PGVNVEHPDW 
TRTLCAERNA LGTAVSYGIA PSTWRALFLS CVNDVRGTPC GACRQLLAEH RSDLSVWMDR 
GSKNPPEHMR VDLLLPGFFV LQ