| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1235 |
|---|
| Symbol | |
|---|
| ID | 8567883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 1444679 |
|---|
| End bp | 1445671 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | Polyprenyl synthetase |
|---|
| Protein accession | YP_003290513 |
|---|
| Protein GI | 268316794 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGTCA CGCGCCAGGA GGCTGCTGCG CAGGTGGCCC GACTGCGCCG GCTCGTGGAG
CAGGCGCTGC CCGGTCTGGT CGAGGCCACG CGCGAGCCGG CCGAACTCTA CGAACCCGTT
CGCTACGTGC TGAGCGGTAC GGGCAAGCGC ATGCGCCCGG TACTGCTCAT GCTGGCGGCC
GAACTCTACG GCCGACCGGC CGAGTCGGTG CTTCCGGCCG CGCTGGCCGT CGAGGTCTTC
CATGCCTTCA CGCTCGTGCA CGACGACATC ATGGACCATG CGGCCGAGCG CCGGGGCCGG
CCGACGGTCC ACGTGCAATG GGACGAGGCC ACCGCGCTGC TCTGCGGCGA CTACCTGATG
GGCCTTTCCT ATGCGCTGCT GGGGCAGGTA GAAAATGCCC CGCTGGCGCG CGTGCTGGCC
ATGTTTCACC GCATGGTGGA ACGCCTCTGC GAAGGCCAGG CGCTCGACAA AGCCTTCGAG
ACGCGCGCGC ATGTCTCCGT GGCCGAATAT CTGCAGATGG TGGACGGCAA AACGAGCGCG
CTGCTGGAGC TGTGCCTGCA GCTGGGCGGA CTGCTGGGCG GTGCCGGCGA AGCCGACCTG
CAGGCGCTCG AGCAACTGGG GCGCAACCTG GGGCGGGCCT TTCAGATTCA GGATGATCTG
CTGGATCTGA CCGCCACCTC TCCGCAGTGG GGCAAGCCCA TCGGTGCGGA TCTGATGGAA
GGGAAAAAGA CGTTCCCCGT GCTGGCCGCC CTCGAACAGG CCAGCGATGG CGAACGCGTC
TGGTTCGAGG AGCGTTTACG GCGGAGGTTT CGTCCCGAGG AGGTGCCGGA GGCGCGGCAG
CGCCTGGAGC GGCTGGGCGG GCTGGAAGCG GCCCGCCGGG CGGTCGATCG CTATCTGCAG
GAGGCCCGGG CCGCGCTGGC GCAGTTGCCC GATCGTCCGC CGGCACAGGC CCTGGCCTGG
TTCCTCGACC AGCTGGCGCA GCGTCGTCAC TGA
|
|---|
| Protein sequence | MEVTRQEAAA QVARLRRLVE QALPGLVEAT REPAELYEPV RYVLSGTGKR MRPVLLMLAA
ELYGRPAESV LPAALAVEVF HAFTLVHDDI MDHAAERRGR PTVHVQWDEA TALLCGDYLM
GLSYALLGQV ENAPLARVLA MFHRMVERLC EGQALDKAFE TRAHVSVAEY LQMVDGKTSA
LLELCLQLGG LLGGAGEADL QALEQLGRNL GRAFQIQDDL LDLTATSPQW GKPIGADLME
GKKTFPVLAA LEQASDGERV WFEERLRRRF RPEEVPEARQ RLERLGGLEA ARRAVDRYLQ
EARAALAQLP DRPPAQALAW FLDQLAQRRH
|
|---|
| |