Gene Rmar_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1193 
Symbol 
ID8567840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1395398 
End bp1396381 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content65% 
IMG OID 
ProductCoproporphyrinogen oxidase 
Protein accessionYP_003290471 
Protein GI268316752 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATGG ACGATCATGC CCGCGTCAAT CGGTTGCGCG AGGAACCACG CACCGACATT 
CCGATGGCGC ATCGCGTGCA GCGCTTTGTT GAAGCGCTGC AGCGGCACAT CTGCAAGGCC
ATAGAAGACG TCGACGGCGC CGCGCAGTTT CGGCGCGATC CCTGGAAGTA TCGCGAAGGG
GGTGGGGGAC TGACCTGCGT GCTGGAAAAC GGTGCCGTCT TCGAAAAGGC GGGCGTCAAC
ACGTCGGCCA TCTGGGGACA ACTCACAGAG CGAGCGGCCC GGGCCATCGG CGTGCATCCC
GCCCCGTTTT TCGCCACGGG CCTTTCGCTG GTCATTCATC CCCGTTCGCC CTACGTCCCC
AGTGTCCACG CCAACTTCCG CTACTTCGCG CTGGGTGACG ACCTGTTTCA CCCAGAGGAT
CAGTGGTTCG GTGGCGGCGC GGATCTGACG CCCTACTATC CGTTCCTGGA AGACGTGCAG
CACTTTCACC GCGTCTGGAA GGAGGTGTGC GACCGGCATC CGGGCGTGGC CGACTACGCG
CGCTTCAAGG CGGCCTGCGA CGCGTATTTC TACCTGCCGC ATCGGGGCGA AATGCGCGGG
GTGGGCGGTA TTTTCTACGA CTACCTGCGT GACGATCCCG AAGGCGCGTT TTTCTTCACC
CGGGAGGCCG GCCGCGCCTT CCTGCGCTCG TACCTGCCCA TCGTCGAGCG CCGCAGGGAT
ATGCCCTACG GCGAGCGCGA GCGGCACTTT CAGCTGCTGC GACGTGGCCG CTACGTGGAG
TTCAACCTGA TCTACGACCG GGGCACGCGC TTCGGACTGG AGTCGAACGG TCGCACCGAA
AGCATCCTGA TGAGCCTGCC GCCCGAGGTG CGCTGGCAGT ACGACTGGCG TCCCGTGCCC
GGCTCGCCCG AAGAGGCGGC GCTCTGGTTC TTCCAGCCGC GCGACTGGCT GGCACTGACC
GAGGCCGACG TGCCGCAGCC GTAG
 
Protein sequence
MMMDDHARVN RLREEPRTDI PMAHRVQRFV EALQRHICKA IEDVDGAAQF RRDPWKYREG 
GGGLTCVLEN GAVFEKAGVN TSAIWGQLTE RAARAIGVHP APFFATGLSL VIHPRSPYVP
SVHANFRYFA LGDDLFHPED QWFGGGADLT PYYPFLEDVQ HFHRVWKEVC DRHPGVADYA
RFKAACDAYF YLPHRGEMRG VGGIFYDYLR DDPEGAFFFT REAGRAFLRS YLPIVERRRD
MPYGERERHF QLLRRGRYVE FNLIYDRGTR FGLESNGRTE SILMSLPPEV RWQYDWRPVP
GSPEEAALWF FQPRDWLALT EADVPQP