Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1191 |
Symbol | |
ID | 8567838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 1394370 |
End bp | 1395098 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | pseudouridine synthase |
Protein accession | YP_003290469 |
Protein GI | 268316750 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.8752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGAGG TAGCGGAACT CCCTGTGCTG TACCTGGACA ACCACCTGCT GGTCATCAAC AAGCCGTCGG GATTGCGCAG TCAGGGCGAT CGGAGCGGGG CGCCGACCGT GCTCTCGCTG GGCAAGGCGC TGATCAAGGA GCGCTTCAAC AAGCCCGGAA ACGTCTATCT GGGGCTGGTG CATCGGCTGG ATGCGCCGGT GTCGGGCGTG ATGGTACTGG CCCGTACGTC CAAGGCGGCC GCCCGACTGA TGCAGCAGTT CCGGGAACGC ACGGTGGAAA AGGTGTACCT GGCGCTGGTG GAAGGCGAGC TGGAAGGCAG CGGCACCTGG GAGGATTTCA TTGCCCCGGC CCGCGACCAC ATGCGTCTGG TGCCGGAAGA CCATCCGTTC GGGAAACGCG CTGTTCTGCA CTGGCAAGCG CTCATGACGC GCAACGGCCT GACGCTCATG CGCCTGGTGC CCGAAACCGG CCGCAAGCAC CAGATCCGGG TGCAACTGGC CTTCCGGGGC TATCCCATCC TCGGCGACCG GCGCTACCGG GCGCGTCGCT GGCTGGCGCC CGGACAGATG GCACTGCACG CCTGGAAGCT GGCGCTCACG CATCCGACCC GCCGCGAGCG CATGCAGTGG ACGGCACCCG TGCCGTCCTT CTGGGACGAA GCCTTCCGGG TGCGCGTCGA TCGATTGCTG GCCTATCTGG AAGCTTCCGG TCCCGAAGGC ATCCGGTAA
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Protein sequence | MLEVAELPVL YLDNHLLVIN KPSGLRSQGD RSGAPTVLSL GKALIKERFN KPGNVYLGLV HRLDAPVSGV MVLARTSKAA ARLMQQFRER TVEKVYLALV EGELEGSGTW EDFIAPARDH MRLVPEDHPF GKRAVLHWQA LMTRNGLTLM RLVPETGRKH QIRVQLAFRG YPILGDRRYR ARRWLAPGQM ALHAWKLALT HPTRRERMQW TAPVPSFWDE AFRVRVDRLL AYLEASGPEG IR
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