Gene Rmar_1191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1191 
Symbol 
ID8567838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1394370 
End bp1395098 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content66% 
IMG OID 
Productpseudouridine synthase 
Protein accessionYP_003290469 
Protein GI268316750 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.8752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGAGG TAGCGGAACT CCCTGTGCTG TACCTGGACA ACCACCTGCT GGTCATCAAC 
AAGCCGTCGG GATTGCGCAG TCAGGGCGAT CGGAGCGGGG CGCCGACCGT GCTCTCGCTG
GGCAAGGCGC TGATCAAGGA GCGCTTCAAC AAGCCCGGAA ACGTCTATCT GGGGCTGGTG
CATCGGCTGG ATGCGCCGGT GTCGGGCGTG ATGGTACTGG CCCGTACGTC CAAGGCGGCC
GCCCGACTGA TGCAGCAGTT CCGGGAACGC ACGGTGGAAA AGGTGTACCT GGCGCTGGTG
GAAGGCGAGC TGGAAGGCAG CGGCACCTGG GAGGATTTCA TTGCCCCGGC CCGCGACCAC
ATGCGTCTGG TGCCGGAAGA CCATCCGTTC GGGAAACGCG CTGTTCTGCA CTGGCAAGCG
CTCATGACGC GCAACGGCCT GACGCTCATG CGCCTGGTGC CCGAAACCGG CCGCAAGCAC
CAGATCCGGG TGCAACTGGC CTTCCGGGGC TATCCCATCC TCGGCGACCG GCGCTACCGG
GCGCGTCGCT GGCTGGCGCC CGGACAGATG GCACTGCACG CCTGGAAGCT GGCGCTCACG
CATCCGACCC GCCGCGAGCG CATGCAGTGG ACGGCACCCG TGCCGTCCTT CTGGGACGAA
GCCTTCCGGG TGCGCGTCGA TCGATTGCTG GCCTATCTGG AAGCTTCCGG TCCCGAAGGC
ATCCGGTAA
 
Protein sequence
MLEVAELPVL YLDNHLLVIN KPSGLRSQGD RSGAPTVLSL GKALIKERFN KPGNVYLGLV 
HRLDAPVSGV MVLARTSKAA ARLMQQFRER TVEKVYLALV EGELEGSGTW EDFIAPARDH
MRLVPEDHPF GKRAVLHWQA LMTRNGLTLM RLVPETGRKH QIRVQLAFRG YPILGDRRYR
ARRWLAPGQM ALHAWKLALT HPTRRERMQW TAPVPSFWDE AFRVRVDRLL AYLEASGPEG
IR