Gene Rmar_1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1189 
Symbol 
ID8567836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1390985 
End bp1392133 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content66% 
IMG OID 
Producttransposase, IS605 OrfB family 
Protein accessionYP_003290467 
Protein GI268316748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACGC TGACGCTGCG CACACGGCTT GAGCCCACGC CCGCGCAAGC CGACGCCCTC 
CAGGAAACCC TCGAGCGCTT CGCGCAGGCG TGCAATCTGA CGCTGGAGGT GGCCCGTGCA
TGCCGCACCT TCAGCAAGTT CAAACTCCAG CGGCTCGTCT ATGGACAACT CCGCGCGCTG
GGCCTGTCGG CCAACCTGGC CATTCGGGCC ATCGCCCGCG TGGGAAGGCG CAAAGGGCAT
CGCGCAAAGC ACTACCGCCC CACCTCCTGT GACTATGACC AGCGCACGCT CTCGCTGCGA
GGCGAAAGCG TCAGCCTTTC GACTACGCAC GGGCGCCTGC GCATTCCCAT GCGGCTGAGT
CCATACCATC GCTACTGGCT TGCTCGGGCG CGCAGTGTGC AGGGTGGGAG GCTGCTTCGC
GACCGACGCG GACGCTGGTA TGTCCACCTG ACCGTTCGCG TTGCGGTGCC GGAAGCATTG
CCGACCGGTC GGGTGGTGGG CGTCGATCTA GGGCAGCGCC TCTTGGCGGC GCTTTCGACG
GGCGAGCGTC TGTCCGGGGG CGCGCTCAAG ACGAAGCGGC TCCACTACCG CGCAAAACGC
GCCGAGATCC GCTCGAAGCT GGATCGCCCT TCCGAACGCA CCCGGTCGCT GAGGCGGCTG
TGGGCACGGC TTTCGGGGAG GGAGCGGCGC TTTGTGCGGC AGGTGTTGCA TGAGGCGAGT
CGCCGCATTG TGGACGGCCT TGCGCCCGGC GATGTGCTGG CGATCGAAGA CCTTCGCGGT
CTTCGCGGAC GTACGAAGCG AAAGGGCAAA GCGGCGCGCC ACCTGCACCA GTTGTGGCCG
TACGGTTTGT TTCGGCACTT GCTGGAATAC AAGGCCCGGC TCAAGGGGGT GCGGGTGGTG
GTGGTCGATC CGGCGCATAC GAGCCGGACG TGTCCGCGTT GTGGGCACAT CGATCGGCGC
AATCGTCGGA GTGGGCGGCT GTTTCGGTGC CGGGCATGCG GTTTTCAGCA CAATGCGGAT
GTCGTTGCAG CAATGAACCT TGCCCGAAGA GCGGGCTCTG AGGGCATGGG TCGTTGTCAG
CCGGCCCCTG GTGCTATCCC GGCCGGTGGT CGGGAGGGCA AGCCCACGAC TTCAGTCGTG
GGTAGCTGA
 
Protein sequence
MQTLTLRTRL EPTPAQADAL QETLERFAQA CNLTLEVARA CRTFSKFKLQ RLVYGQLRAL 
GLSANLAIRA IARVGRRKGH RAKHYRPTSC DYDQRTLSLR GESVSLSTTH GRLRIPMRLS
PYHRYWLARA RSVQGGRLLR DRRGRWYVHL TVRVAVPEAL PTGRVVGVDL GQRLLAALST
GERLSGGALK TKRLHYRAKR AEIRSKLDRP SERTRSLRRL WARLSGRERR FVRQVLHEAS
RRIVDGLAPG DVLAIEDLRG LRGRTKRKGK AARHLHQLWP YGLFRHLLEY KARLKGVRVV
VVDPAHTSRT CPRCGHIDRR NRRSGRLFRC RACGFQHNAD VVAAMNLARR AGSEGMGRCQ
PAPGAIPAGG REGKPTTSVV GS