Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1128 |
Symbol | |
ID | 8567774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 1305883 |
End bp | 1307724 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003290407 |
Protein GI | 268316688 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.135048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGATGA AACAGAGGCT GCGTATATAC CTGCGCCGTC ATTTCTGGCG CACGGACGAA GGCATGCGCC TGGTGCTCCG CCAGCTCTGG GAGCATCGGC GGCTGTTTGT GGGGACGGTG GTGCTGACCG GCCTCAGTGC TGCCTTTGAG GGGGTCGGGC TTGGATTGCT GGTCCCCTTT CTGGATAGCC TGATGAATCC CGAAGCCGGG GCATTTGCTA CGGGCTGGAG CTGGGTCGAT CAGCATCTGT TGCGTGTCGA GGCGCCCGTC ATGACACGCC TGTACTGGTT TTCCGGTCTG ATCCTGCTGA CGATTCTGTT GCGGGGGGGA CTGGGCTATG CGGCCCAGCA GTTCAGCATC CGATTGCAGG AGTCCATCCT GCATCGGTTG CGCTGTCAGA TCATCGACCA GCTACAGGCT GTTTCACTCA AGTTCTATGC GCATCGGCGG GCCGGTGATC TGCTGAACGT ACTCACGGCC GAAATTCAGC GGTTGCGTTT TCTGTTTGGG ACGTCCAGCG CTATTCTGAT TCAGGGATTT TTGCTGGTCG TATACGGTAC GGCGATTTTT GCGCTTTCGT GGCCACTGGC GCTGGTGGCT GTTGGCCTGA CGCTCGGGCT GTTTGTGGTG GTACGCGCCT TGATTGCCCG CCTGAAACGA GAAGGCAATG CGATCACGCA GACGAACAGC TGGATTGCCT CGCGGGCGCA GGAGCTGATC AGCGGCATTC GTACGGTGCT GACGCACGGG GCCCAGCCGT TCGAGTCGGC CCGGTTCAAG CAGGTCAGTC GAGAGGCGGC CGATGTGGTG GTGCGGCTCA GCTGGAAGCA GTCGCTTATT GGCCCCCTTT CGCAGGCAGT CGCTTCGGCT GCATTAATCG GACTGATCAT TGTGGCCGTG CAGTTTTTCG TGCTGCCGGG GCGCATGAGC ATGGCCGTGC TGATCACGTT TCTGTTCGCC TTCTTTCGCA TGCTTCCCAT GGTGCAGAAC ATCAATGACC TGCGGGCTAT GTGGGCCAAG CAGCGGGGAG CTGTAGATGC GGTGGCCGCT ATTCTGCGTC GGGACGATAA GCCCTATCTG CCGGACGGCA CGCTTCCGTT TGAGGGGTTG CGGGAAGCGA TCGAGTTGCG TCATGTCTGC TTCGGCTACG AGCCCGGCCA GCGCGTGCTG CACGACATCA ATCTGACGAT CCGAAAAGGG CAGACCGTGG CCTTTGTGGG CGCCTCAGGG GCCGGCAAGA GCACGCTGGC CGACCTGATC GTGCGCCTCT ACGACCCGGA CGAGGGGCAG ATCCTCTACG ACGGCATCGA CCTCCGACAG TACCGGCTCG ACACGCTCCG CCGCCGGGTG GCCATGGTGA GTCAGGAGAC GTTCCTGTTT CACGACACGA TCCGGGCCAA CATTGCCTAC GGGCTGGAGA ATGTACCGGA GGAGCGCATC CGGTGGGCGG CCGCCCAGGC CAATGCACTC GAGTTCATCG AGCAACTGCC GGAGGGGTTC GACACGGTGG TGGGCGACCG GGGCGCGCGG CTTTCGGGCG GGCAGCGTCA GCGGATTGCC ATCGCCCGGG CGCTCCTGCG TGATCCCGAC ATCCTGGTGC TCGACGAAGC CACCAGCGCG CTCGACAGCA TTTCCGAGCG GCTGGTGCAG GAGGCGCTTG AACGCCTGAT GGCCGGACGT ACGGTGATCG TCATCGCCCA CCGCCTTTCG ACCATCGAAA ACGCCGACCT TGTGGTCGTC CTCGAAGCCG GCCGTATCGT GGAGCAGGGG ACGTATGAGG AATTGCTTGA ACGCCAAGGA TATCTGTGGA AGTATCATCA CTTGCAATAC CAGGTCGTAT GA
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Protein sequence | MGMKQRLRIY LRRHFWRTDE GMRLVLRQLW EHRRLFVGTV VLTGLSAAFE GVGLGLLVPF LDSLMNPEAG AFATGWSWVD QHLLRVEAPV MTRLYWFSGL ILLTILLRGG LGYAAQQFSI RLQESILHRL RCQIIDQLQA VSLKFYAHRR AGDLLNVLTA EIQRLRFLFG TSSAILIQGF LLVVYGTAIF ALSWPLALVA VGLTLGLFVV VRALIARLKR EGNAITQTNS WIASRAQELI SGIRTVLTHG AQPFESARFK QVSREAADVV VRLSWKQSLI GPLSQAVASA ALIGLIIVAV QFFVLPGRMS MAVLITFLFA FFRMLPMVQN INDLRAMWAK QRGAVDAVAA ILRRDDKPYL PDGTLPFEGL REAIELRHVC FGYEPGQRVL HDINLTIRKG QTVAFVGASG AGKSTLADLI VRLYDPDEGQ ILYDGIDLRQ YRLDTLRRRV AMVSQETFLF HDTIRANIAY GLENVPEERI RWAAAQANAL EFIEQLPEGF DTVVGDRGAR LSGGQRQRIA IARALLRDPD ILVLDEATSA LDSISERLVQ EALERLMAGR TVIVIAHRLS TIENADLVVV LEAGRIVEQG TYEELLERQG YLWKYHHLQY QVV
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