| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1078 |
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| Symbol | |
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| ID | 8567719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | + |
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| Start bp | 1242827 |
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| End bp | 1244356 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003290358 |
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| Protein GI | 268316639 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.227742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACAT ATCTGTCGAT GCCAACCCGC TGGCTCCTGA GCCTCCTGCT GCTGGTCGGA
TTGACCGGGT GCGGTGAGGG CTTTCTGGAA GAGGAGCCGC GCACGTTCGT CAGCACCGAG
GCCGTGCTGA ACTCGCCCGA GGGCCTGGAA GGCGCCGTGG TGGCCCTTTA CGACTTCCCG
ACCTGGATGT ACCACAGCAC GCGCTACAGC TACTGGTTCA TCTCGGGCAC CGACGTGGCC
CGAATCGGAC CGCTCCACGA AGATCGGGGG ACGGCCCTTT ACAACACCGA TCTCAACCCG
CAGCACGGTG CTTCGCGGGA ATACTGGAAC CAGTCGTACC AGACCCTCTA CCGCGCCAAT
GCCATTATCG CCGCGGCTCC GAACGTGGAC TTCGACGGCG ACGAGGCCCG GCGCAACCGG
GTTATCGCGG AGGCCCGTTT CTTCCGAGCC TACATCCTGT TCTATCTCCA CCAGCGCTAC
GGCAATATCC CGCTGGTGAC CGAGCCTTCG GAGACCATCC GCGAGAAAGA ACAACCCGCC
GATCCGGCAG ACATCTACCG GGTCATTGTC GACGACCTCC GGTTTGCCAT CGACAATCTG
GCATGGACGT ACGACGACCA GCCCGGCCGG ATCACGAAGG GCGCGGCCAT GCACCTGCTG
GCCAAGGTCT ATCTGGTGCT CCAGAACTGG CAGCAGGCAG CCCAGACGGC CGAAACGCTC
ATCCTGCAGG GGCCCTATGA GCTGCTGGAC GACCCGGCCG AAATCTTTGC GGACAACAAC
GAAAACAACA AAGAGGCGAT CTGGACCATT CAGTTCGATC CGCAGGCCGA CAACTACGGT
CATTTTCTGG CCGTGATGTT CACGCCGCTT TACGACCGCA TTCAGGGCGT GGCGCGTACC
TTCGAGCAGG GCGGCCGGCC CTGGGCCCGT ATGTACCCCA GCGCCTACCT GCTCAGCCTC
TTCGACAAAA ACGACCGGCG GCTGAAAGCC TGGTACAAGA CGCACTGGGT CTACGACGAC
CCCGACGAGG GGCTGCCGCC GGGCCGTCAG GTGGGCGACA CGGTGCGTAC CTCGGACTTC
AACCCGCCGC CGGATTCAAT GCTCTACCTG CATCCGGCCT GCAAGAAGTA CTGGGAGTAT
GGCGCAACCC GCGATATCAA CCAGGCCGAC TCCTACAAGG GCATCATCCG CTATCGCCTG
GCCGAAACCT ACCTGATCGC CGCCGAAGCC TACATGCGCC TGGGCGATCA GGCCAAAGCG
CTCGAATACA TTAACCCGCT GAGGCGGCGG GCCGGTGTAC CCGACCTGAC CGAACTCAAC
GAGGACATTC TGCTCGAAGA GCATGCCCGC GAACTGGCCT TCGAACAGGA CCGGTGGTTT
ACACTCAAGC GCATGGGACG CCTGGTGCAG CACGTGCGCC AGTACAATCC GGATGCGGCA
CCCAATATCA AAGACTGTCA TGTAAACATG CCCATTCCGC AGGAATTTGT GGACCTGACG
GGCTTCCCGC AGAATGACTG CTATCGCTGA
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| Protein sequence | MKTYLSMPTR WLLSLLLLVG LTGCGEGFLE EEPRTFVSTE AVLNSPEGLE GAVVALYDFP
TWMYHSTRYS YWFISGTDVA RIGPLHEDRG TALYNTDLNP QHGASREYWN QSYQTLYRAN
AIIAAAPNVD FDGDEARRNR VIAEARFFRA YILFYLHQRY GNIPLVTEPS ETIREKEQPA
DPADIYRVIV DDLRFAIDNL AWTYDDQPGR ITKGAAMHLL AKVYLVLQNW QQAAQTAETL
ILQGPYELLD DPAEIFADNN ENNKEAIWTI QFDPQADNYG HFLAVMFTPL YDRIQGVART
FEQGGRPWAR MYPSAYLLSL FDKNDRRLKA WYKTHWVYDD PDEGLPPGRQ VGDTVRTSDF
NPPPDSMLYL HPACKKYWEY GATRDINQAD SYKGIIRYRL AETYLIAAEA YMRLGDQAKA
LEYINPLRRR AGVPDLTELN EDILLEEHAR ELAFEQDRWF TLKRMGRLVQ HVRQYNPDAA
PNIKDCHVNM PIPQEFVDLT GFPQNDCYR
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