| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1069 |
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| Symbol | |
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| ID | 8567710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | + |
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| Start bp | 1224112 |
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| End bp | 1227105 |
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| Gene Length | 2994 bp |
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| Protein Length | 997 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | glycoside hydrolase family 10 |
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| Protein accession | YP_003290349 |
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| Protein GI | 268316630 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000326536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACCG CTACTGATCT GCGTTTTTTA AGAAACGCGG TTGGAAACGC TTCTCGAAGC
GCTATTTTCC TGTTTCTCGT TTTTTCGCTG GTGGGTCAGG CATGGGGCCA GACGCCGGCA
AATGTCAATG GAAGTTTTGA ATCAACACCA GCCGGGGTAG TGACGGATCT GGCCGGAGGC
GTGGAAGGCT GGGTGTTGAA CGTGGGCTCC TTGGTGACAA ATCCTCCGGT CTTTGAGGTT
GTCGAGGCGA CAGATGCGCC CCATGGTAGC AAGGTGTTGG CGGTGACGGT CAACGGGGCG
GGGAACAATC CCTGGGACAT CGAGGCGACG GCCTTCCCGG TGAACGTGGA GCCCGGCGTG
ACCTACACCT ACACGATCTG GGCGCGGGCC GAGCAGGACG GGGCGGTGGT CAGCTTCACG
GTGGGGAACC AGTCGTACCA GGAGTACGGG CGACTGCACG AGCAGCAGAT CACGACGGAG
TGGCAGCCGT ACACGTTCGA GTTTACGGTC AGTGACCAGG AGACGGTCAT TCGGGCGCCG
ATCCATTTTG GCTATGCGGC CAACGCTGGC AATACCATTT ATATCGATGC CCTCGTGATC
ATGGGTCCCG AGCCGGAGCC TGCCGGACCG GAGCTTGTCG CCAACATCAA CGGTGGATTC
GAATCGACGC CGGCCGGGGT GGTGACGGAT CTGGCCGAAG GTGTGGAGGG CTGGGATCTG
AACGTGGGCT CCTCGGTGAC GAATCCGCCG GTTTTTGAAG TGCTGGAGAC GTCCGATGCC
CCTGAAGGGA ATAAGGTGCT GGCGGTGACG GTCAACGGGG TGGGCAACAA CCCCTGGGAC
ATCGAGGCGA CGGCCTTCCC GGTGAACGTA CGTCCGGGCG TGACCTACAC CTACACGATC
TGGGCGCGGG CCGAGCAGGA CGGGGCGGTG GTCAGCTTCA CGGTGGGGAA CCAGTCGTTC
CAGGAGTACG GGCGACTGCA TGAGCAGCAG ATCACGACCG AGTGGCAGCC GTTCACGTTC
GAGTTTACGG TCAGTGATCA GGAGACGGTC ATTCGGGCGC CGATCCATTT TGGCTATGCG
GCCAACGTCG GCAATACCAT CTACATTGAT GGCCTGGCCA TTGTGGACTC GGTGGGAGCC
TGGCGGCCCG TGATTGTCGA GGCCGAAGAT GGAGAGCTTG GCTCGGAATG GGCGGTGGAG
ACCGAAGGGA ACGTCACCTA CATTACGATC ACGACCGACT ATAATGAAAC CACGGGGGAC
GCAGATCATC CCGGCGAGAA TCGGACGGCC ACTTACCAGG TGACCTTCCC GGCTCCGGGC
TGGTACGATC TCTACGCCCG GGTATATGTG GGACCGGAGA CTTTCAACGA CGACAGCTTC
TTCTATGCAG ATTCGTTTGG CGTGAAGGAT CCGGAATCGC CGGATGACTG GATCATTGCC
AACCAGTTGG CGGCGGCCGG ATATACGGAG CCCGATGAGT ATGTGACAGG CCTTGGGGCG
GCAGGTTCGG AGGTGTGGAA ATGGATAAAC CTTTCAGAGA ATAGTTTCAA CGACGTCCCC
TCCGATTCCT TCTATGTCTC GCCGGAATCG TTGACGGTGA CGTTCATGAT CGGCGCCCGG
GAAAACGGGC TCCGAATCGA CAAGCTGGCC TTTGGACGTT CGGACCTGCT CTATACGGTG
GCGGATCTGG ACACGGGCGG ACCGGGCTCG CCGGAGCCGG AAGAGCCTCC GGTGGTGTTG
CCGGAGCGGC CGCTTGCGGC TGATGTGGAT AAGTTCCTGG GTAATATTTA CAGCCCCTCT
CAGGTAGAGA ATTTCGAGTA TTACTGGAAC TGTGTGACGC CGGAGAATGC GGGCAAGTGG
GGCAGTGTCG AGGGTACGCG GGACCAGATG AACTGGAGCA GTCTGGACGC GGCGTATGCG
CTGGCTCGGG ACAATGGCTT CTGCTTCAAT TTCCATGTGC TGCTCTGGGG AGCGCAGCAG
CCTGCCTGGA TTTCGGAGCT GAGCCCGGAG GAGCAGCTGG AGGAAATTCA GGAGTGGTTC
CAGGCGGTGG CCGAGCGCTA CAGCTTCACC GCGTCGCCGT TCGACGTGGT GCAGGTGGTC
AATGAGCCGC TGCATCAGCC GCCGGATGGT CAGGAGGGAC GGGCCAACTA CATCGAGGCG
CTGGGTGGTG CCGGCGAGAC AGGCTGGGAC TGGGTGATCA CAGCCTTCGA ACTGGCCCGG
CAGATTTTCC CGGAGGGCAC GCGGCTGATG ATCAATGACT ACGGCATCCT CAGCAGTCTG
GAAACGGCCC AGCAATATCT GGAACTGATT CAACTGTTGA AGGAGCGCAA CCTGATCGAC
GTGATCGGGG TGCAGGGGCA TGCTTTCTCG ACGCGTTCCG GGGCGCCGAT TCAGGAAGTG
CTGGATCTGC TGGCCACGAC GGGATTGCCG ATTCAGGTTA CCGAGATGGA TATCGACGGC
AATCCCAATC AGAGCCCCTT CGTGACGCGG GAGCAGTCCG AGCAGAATCA GCTCCGGGAC
ATGCAGCGCA TCTTCCCGAC CGTATGGTAT CATCCGGCTG TGGAAGGGGT GACGTTCTGG
GGCTGGCGGC CCGGCCTGTG GCGCAATGAT TACGAAGCCT ACCTGGTGTA CAGCAACGGC
GCTGAGCGTC CGGCCATGGT GTGGCTGCGG GAATTCATGG AAGCCTATCG AGAGTCGTAC
CTGAGCGCCA ACGAGCCGGA AGGGACGTTG CCGGAGGAGC TTTCGGTGGT TTCCTGGCCG
AATCCGTCCC GTGGTCAGGT GCGCTTCCGC TACGCCCTGC CGTTCGAGGC GGAGGTGCGC
CTGCAGGTGT TCGACGTGCT GGGACGTGAA GTGATGACGC TGGCCTCCGG ACGGCATCGG
GCCGGGGTGT ACGAGGTGGC TTTCGACGGC CGGCATCTGC CCAGCGGACT CTACCTGTAT
CGACTGGAAG CGAATGGGCG GGTACGGAGT GGCCGGCTTG TGCTGATGCG GTAA
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| Protein sequence | MRTATDLRFL RNAVGNASRS AIFLFLVFSL VGQAWGQTPA NVNGSFESTP AGVVTDLAGG
VEGWVLNVGS LVTNPPVFEV VEATDAPHGS KVLAVTVNGA GNNPWDIEAT AFPVNVEPGV
TYTYTIWARA EQDGAVVSFT VGNQSYQEYG RLHEQQITTE WQPYTFEFTV SDQETVIRAP
IHFGYAANAG NTIYIDALVI MGPEPEPAGP ELVANINGGF ESTPAGVVTD LAEGVEGWDL
NVGSSVTNPP VFEVLETSDA PEGNKVLAVT VNGVGNNPWD IEATAFPVNV RPGVTYTYTI
WARAEQDGAV VSFTVGNQSF QEYGRLHEQQ ITTEWQPFTF EFTVSDQETV IRAPIHFGYA
ANVGNTIYID GLAIVDSVGA WRPVIVEAED GELGSEWAVE TEGNVTYITI TTDYNETTGD
ADHPGENRTA TYQVTFPAPG WYDLYARVYV GPETFNDDSF FYADSFGVKD PESPDDWIIA
NQLAAAGYTE PDEYVTGLGA AGSEVWKWIN LSENSFNDVP SDSFYVSPES LTVTFMIGAR
ENGLRIDKLA FGRSDLLYTV ADLDTGGPGS PEPEEPPVVL PERPLAADVD KFLGNIYSPS
QVENFEYYWN CVTPENAGKW GSVEGTRDQM NWSSLDAAYA LARDNGFCFN FHVLLWGAQQ
PAWISELSPE EQLEEIQEWF QAVAERYSFT ASPFDVVQVV NEPLHQPPDG QEGRANYIEA
LGGAGETGWD WVITAFELAR QIFPEGTRLM INDYGILSSL ETAQQYLELI QLLKERNLID
VIGVQGHAFS TRSGAPIQEV LDLLATTGLP IQVTEMDIDG NPNQSPFVTR EQSEQNQLRD
MQRIFPTVWY HPAVEGVTFW GWRPGLWRND YEAYLVYSNG AERPAMVWLR EFMEAYRESY
LSANEPEGTL PEELSVVSWP NPSRGQVRFR YALPFEAEVR LQVFDVLGRE VMTLASGRHR
AGVYEVAFDG RHLPSGLYLY RLEANGRVRS GRLVLMR
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