Gene Rmar_1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1060 
Symbol 
ID8567701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1210119 
End bp1211348 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content65% 
IMG OID 
ProductDSBA oxidoreductase 
Protein accessionYP_003290340 
Protein GI268316621 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.533391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCTC GAAATCTGTC GGATGTACGT GGACGCCTGC GCAACCGCCG GGCCGGACTC 
AACCGCCTGA TTTTTGGCCT GGCGCTGCTG GGCCTGCTCG ACACGACGCA CCTCTGGGTG
CAGCAGCAGC GCCAGTTCGA AGAAGGGTGC TTCGGCGTGG CGAGTCTGGC GCCGCTGGAA
AAGGCCTTCG ATTGCGCCTC GGTGGTGCAG AGCGCGGCCG GCACGCTGCT GGGCGTCTCA
AACACGATCT GGGGCGCGCT GTTTTACGCC GCCGTGGCCC TGCTGAGCGC GCTGGCGTTG
TTGCGTCCGG CCCTGCACCG GCATCGGTAT AAGCTGATCC GGGCCGGACT GCTCGGCGTC
GGGTTGCTTT ACACGCTCTA CCTGCTCTAT TATCAGGCAT TCGAGCTGGC CACGTTCTGT
GCGCTGTGCC TGGTTTCGGC CGGGCTGGTG CTGACGATGG CCGGCCTGCA GGCTTACGAA
CTGTTCACCT TTCGACCGGC TACCATGGAA CGACCGGAAC GCATCCGCAC CGAACGACTG
GCCCTGGGCG GACTGGCGCT GGCTGCGCTG CTGCTCATGG GCGCCGACGT GTACCTGAAC
GACGCGCTTT CGCCGAAAAC CTCGACCACC ACGGCCGCCG CAGCGACCGA AGCGCAACCG
GCCACGCAGA CCTGCAGCTT CGATACAGAG CGGCCGCCGG TGCGCTACTT CCGCGACCTG
ATCATGATGA ACGACCCCAC GGCGGGCAAT CCCGACGCGA AGGTGGTCGT CATCGAATAC
CTCGATCCCA ATTGCCCGCA CTGTAAGCAC CTGCACCCGA TCATGAAGCA GGTAGTGGAA
AGCTACGGGC TGCAGGCCTA TTTCGTCTTC AAGCCGATCC CGCTCTGGCA GTTTTCCATC
CCGCAGGTGG CTGCGCTGTA CGCCGCCGCC CGGGAGGGGA AGTTCGAGGC CATGCTGGAG
GCGCAGTTCG AACGCCAGCG CTCGGGTGGA CTGACGCTGG AGGAAATTCT CGACATCGCC
GAGGCGATCG GCATGGACCG AAACGAGCTG GCCCGGCAGA TCAACGAGGG CGTCTTCAAC
GAATACATGC AACGGCAGAG CCGACAGGCC AGCATGATCG GCGTGCGGGG CGTTCCCACC
GTGCTGATCA ACGGCCACTT CGTGCCGGGC TACGCCCGGA CCGTCGAATG CCTCGGCCAG
CTGATCGAAC AGCAGGCGAA GGGCTCCTGA
 
Protein sequence
MAARNLSDVR GRLRNRRAGL NRLIFGLALL GLLDTTHLWV QQQRQFEEGC FGVASLAPLE 
KAFDCASVVQ SAAGTLLGVS NTIWGALFYA AVALLSALAL LRPALHRHRY KLIRAGLLGV
GLLYTLYLLY YQAFELATFC ALCLVSAGLV LTMAGLQAYE LFTFRPATME RPERIRTERL
ALGGLALAAL LLMGADVYLN DALSPKTSTT TAAAATEAQP ATQTCSFDTE RPPVRYFRDL
IMMNDPTAGN PDAKVVVIEY LDPNCPHCKH LHPIMKQVVE SYGLQAYFVF KPIPLWQFSI
PQVAALYAAA REGKFEAMLE AQFERQRSGG LTLEEILDIA EAIGMDRNEL ARQINEGVFN
EYMQRQSRQA SMIGVRGVPT VLINGHFVPG YARTVECLGQ LIEQQAKGS