Gene Rmar_1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1028 
Symbol 
ID8567669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand+ 
Start bp1178150 
End bp1178776 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content68% 
IMG OID 
Productribosomal protein S16 
Protein accessionYP_003290309 
Protein GI268316590 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGTCA GACTACGTTT GCGTCGACTG GGTCGGAGGA ATCTTCCGAT TTTCGCCATT 
GTGGCGGCCG ATGCGCGGTC GCCGCGGGAT GGGCGTTTCA TCGAAGATCT CGGGCGTTAC 
TATCCGCTGC ACGAGCCGGC CACGGTCGAG CTGAAAACCG ACCGGGTGAT CTACTGGCTG 
GAGCGGGGGG CGCAGCCGAC CGAGACGGTG CAGAGCATTC TGCGGCGGGA GGGCATCCTG 
CTGGCCATGC ACCTGCGCCG CAAAGGTAAG TCGGAGGAAG AGATCCAGCA GGCGGTGGCC 
GAGCACCGCG CCCGCCAGTA CGAGAAGCTG ATGAAGAAGG CGAAGCCGAC CGTGGCGCAG 
CTGAAGCAGG CGGCGCTGGA AGAGGAGCGG CGGCGGGCCG CCGAGCTGGA GGCGGAACTG 
GCCCGGCAGC AGGCCGAGGC GGAGGCGAAA GCCCGTGCCG AAGCCGAGCA GCAGGCTGCG 
GCCGAGGCCG CCGAAGCCGA AGCGGAGGCC GCTGAAGCCG AGGCGGAGGC CGCCGAGTCC 
GAAGCGGTAG CCGAAGCGGA AACGCCCGCC GAGCCGGAAG CGGCAACCGA GGAGTCGGCG 
AGCGACGAAG AAGAAAAGGC GTCCTGA
 
Protein sequence
MAVRLRLRRL GRRNLPIFAI VAADARSPRD GRFIEDLGRY YPLHEPATVE LKTDRVIYWL 
ERGAQPTETV QSILRREGIL LAMHLRRKGK SEEEIQQAVA EHRARQYEKL MKKAKPTVAQ 
LKQAALEEER RRAAELEAEL ARQQAEAEAK ARAEAEQQAA AEAAEAEAEA AEAEAEAAES 
EAVAEAETPA EPEAATEESA SDEEEKAS