Gene Rmar_0925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0925 
Symbol 
ID8567563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1050381 
End bp1053281 
Gene Length2901 bp 
Protein Length966 aa 
Translation table11 
GC content68% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003290207 
Protein GI268316488 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTGC TGTCGCTGCT GCTTGTCGTC TGCAGTGCTA CGCTGCTGGC CTTTGCCCAT 
CGCTCCGAAC TCGATACCGC GCCGCCGGAT CGAACGCGTC CGGGCGCCTG GACCGAAACC
CAGCTCCGCA CGCTGACGCT GGCGCAGCAG ATCGGCCAGC TCTTTGCCGT GCGGGCACGC
GGCGTCTTCC AGAGCGTGGA CGATCCGGAC TACCGCGAGC TGGTACGGCT GGTCGAGCAG
TTTCAGGTGG GCGGCGTCAT TTTCTTTCAG GGAGACCCCT ACAGCCAGGC CATGCTGGCC
AACGAGTTGC AGCGTCGGAG CCGCCTGCCG CTGCTCATCG CACAGGATAC CGAATGGGGC
GTGGCCATGC GCGTCCGTCG CACGACGAGC TTTCCGCGGG CCATGGCCAT CGGCGCCACC
GGCAACCCGG ATTACGCCTA TGCGGTCGGC TACGTGACCG CCCGCGAAGC GCGCGCGCTG
GGCGTGCACC AGCTCTACGC CCCGGTGGCC GACGTGAACA ACAACCCGAT GAACCCGATC
ATCAACGTCC GCGCTTTCGG CGAAGACCCG CTCCAGGTCG CCACCATGGT ACGCGCCTTC
GTGCGCGGCG TGCAGGACGC CGGCGCCATC GCCACGGCCA AGCACTTCCC CGGCCACGGC
GACACATCCA TCGACTCGCA CAGCGACCTG CCCGTGCTGC GCTTCGATCG GAAGCGACTC
GACACGCTGG AGCTGGTGCC GTTTCGGGCC GCCATCAAGG CCGGCGTGCA GAGCATCATG
ACGGGCCACC TGGCCCTGCC CCGCCTGGAT CCCACACCGA ACCTTCCCGC CTCGCTTTCG
CGCCGGATCA CCCACGAGCT GCTGCGCGAG GAGCTGGGAT TCGACGGGCT GGTGGTCACC
GACGCGCTGG AGATGCAGGG CGTGACGAAG CACTTCGGCG TGGGCGAGGC GGCCGTGCGC
GCGCTGGAAG CCGGAGCCGA CATGCTGCTG CTCTCCGAGG ACGTCGAGGC CGCCCGGTCG
GCCATCCTGC AGGCCGTCGC ACAGGGGCGG CTGTCCCGCG CGCGCATCGA AGCCTCGGTG
CGCCGCATCC TACTGGCCAA AGAGCGGCTG GGCCTGCATC GGGAGCGGCT GGTCGATCTC
AACGCCATCC CCTATGTGGT GGGCATTGCA CCGCACCAGG CGCTCAGCCA GACGATCGCA
CGCGCTTCGC TGACGCTGCT GCGCAACGAA GGCAACCTGT TGCCTCTTCC CGACGTGCCC
GCTACCCCAC GTCAACTACA GGTGATCATC CTCAGCGACA GCGACGACCC CGCCACCGGG
CGCTTTTTCG TGCAGACGCT GCGAGAAATC GCCCCCGACG ACCGCATCGC CTCCCGGCTG
CTGGACGTGC GCTCCCACCC GGACGATTAC CGCGCGGCGC TGGAGGCGGC CGCCCGCGCC
GACGTGGTGC TGGTACCCGC CTATCTGTTC GTCCGCTCCG GCACGGGCCG CATCCGCCTG
CCTGAACGCC AGCGGACGTT TCTGGACGCG CTCATCGCGC AGGGGCGGCC CGTCGTGCTG
ATCGCTTTCG GCAACCCGTA CCTGATCATG GATCTGCAGC GGCCTCCGGC CGTCTATCTG
GCCGCTTACG GAGGAAGCGA ATCCACCCAG CGGGCCGCCG TGCAGGCGAT CTTCGGACAG
GCCCCCTTCA CCGGCCGATT GCCCATTACC ATTCCGGGGC ATTTTCAGCG CGGTGATGGC
CTTCAGCTTG AGCAGGTGGC GCCCCGCCTG GCCTACCCCG AAGAAGTGGG CATGAGCACG
CAGCGGCTCT ACCGGGTCGA TTCGCTGCTC CGGGCGGCCA TCGCCGACAG CGCCTTTCCC
GGCGCCGCCG TGGCCATCGG GCGCGGTCCG GCCATCGTGT GGCTCAAGGG CTACGGGCAT
TTCACGTACA CGTCCGACCA GCGCGTCACC CCGTCCTCGG TCTTCGATCT GGCCTCGCTG
ACCAAGGTGG TGGTCACCAC GACGGCCGCC ATGCAGCTCT ACGAGGCCGG CAAGCTGGAC
CTGGACGCGC CGGTCGTGCG CTATCTGCCC GAGTTCGGTC AGAACGGTAA GGAACGGGTG
ACGATCCGCC AGCTCCTGTC GCATACGGCC GGGCTGGCGC CGTTCCATCC CTTTCACCGC
ATGGGCATCA CCACGGCCGA GGCGGTGCGC CAGGCCATCC TGTCCGATTC GCTGATCTAC
GAGCCCGGCA CGCAGTCCCG CTACAGTGAT CTGGGCATGA TTGTACTGGG CTGGGTCATC
GAGCGCATCA CGGGCCAGCC GCTGGACCGG TACGCCGCGG AGCACATCTT CCGGCCGCTG
GGCATGCGGC ATACGGGCTT TCGACCCGTC GGCCGACCCG ATACGACCGT GGTGCCCACC
GAGATCGATA CGATCTTTCG CCACCGACTC ATTCAGGGCG AGGTGCACGA CGAGACGGCC
TGGATTCTGG GCGGCGTGGC CGGACACGCC GGGCTGTTCT CGACGGCCGA GGACCTGGCC
CGCTTCGCCT ACATGCTGGT CAACGAAGGA CGCATCGGCG GCCGTCCGTT TCTCAAACCC
GAAACGATCC GCCTTTTCAC CACACCGGTC GATCCGGAGC GGGCTGGCAC GCGTGCGCTG
GGCTGGGACA CCCGGAGCCG GGAGGGCTAC TCGTCGGCCG GCCGGCTATT CGGGTCGCGC
AGCTTCGGCC ACACGGGCTT TACGGGAACG TCGATCTGGA TCGACCCGGA CCAGCAACTG
TTCGTCATCC TGCTGACCAA CCGGGTCTAT CCCACCCGGG AAAACCGGAA GCACCTGGCC
GTGCGGGCCC GGCTGGCCGA TCTGGCCTAC GAGGCCCTCA TCGGACCGCC CACGTTGAAC
CTGAACGCGC TCTTGCCGTA G
 
Protein sequence
MRLLSLLLVV CSATLLAFAH RSELDTAPPD RTRPGAWTET QLRTLTLAQQ IGQLFAVRAR 
GVFQSVDDPD YRELVRLVEQ FQVGGVIFFQ GDPYSQAMLA NELQRRSRLP LLIAQDTEWG
VAMRVRRTTS FPRAMAIGAT GNPDYAYAVG YVTAREARAL GVHQLYAPVA DVNNNPMNPI
INVRAFGEDP LQVATMVRAF VRGVQDAGAI ATAKHFPGHG DTSIDSHSDL PVLRFDRKRL
DTLELVPFRA AIKAGVQSIM TGHLALPRLD PTPNLPASLS RRITHELLRE ELGFDGLVVT
DALEMQGVTK HFGVGEAAVR ALEAGADMLL LSEDVEAARS AILQAVAQGR LSRARIEASV
RRILLAKERL GLHRERLVDL NAIPYVVGIA PHQALSQTIA RASLTLLRNE GNLLPLPDVP
ATPRQLQVII LSDSDDPATG RFFVQTLREI APDDRIASRL LDVRSHPDDY RAALEAAARA
DVVLVPAYLF VRSGTGRIRL PERQRTFLDA LIAQGRPVVL IAFGNPYLIM DLQRPPAVYL
AAYGGSESTQ RAAVQAIFGQ APFTGRLPIT IPGHFQRGDG LQLEQVAPRL AYPEEVGMST
QRLYRVDSLL RAAIADSAFP GAAVAIGRGP AIVWLKGYGH FTYTSDQRVT PSSVFDLASL
TKVVVTTTAA MQLYEAGKLD LDAPVVRYLP EFGQNGKERV TIRQLLSHTA GLAPFHPFHR
MGITTAEAVR QAILSDSLIY EPGTQSRYSD LGMIVLGWVI ERITGQPLDR YAAEHIFRPL
GMRHTGFRPV GRPDTTVVPT EIDTIFRHRL IQGEVHDETA WILGGVAGHA GLFSTAEDLA
RFAYMLVNEG RIGGRPFLKP ETIRLFTTPV DPERAGTRAL GWDTRSREGY SSAGRLFGSR
SFGHTGFTGT SIWIDPDQQL FVILLTNRVY PTRENRKHLA VRARLADLAY EALIGPPTLN
LNALLP