Gene Rmar_0831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0831 
Symbol 
ID8567469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp948740 
End bp951466 
Gene Length2727 bp 
Protein Length908 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003290116 
Protein GI268316397 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACGCC TGATGCTACT CCTGACGCTC GCGCTGGCCG CTGCTGCACA GGCCCAGGAC 
CTCGAGGTCG TCTCCACGAC CCCCGCCCAC GGCAGCGCCG GAGTGGACCC GACCACGGCG
GTATCCATCA CGTTCAACAA GGCCATCAAT CCGGCCGACA GTCTCCTTAT CTTTCCGCTG
GACACGCTAT TGCAACAGCA GCTGACCGAT CCGAGTCGGG TTACGTTCAG CCCCGACGGC
ACAACGATCA CCTTCAACGT CACCCATCAG ACCAATCGCG ACTACACCTG GGTGGTGCAC
TACGTCAAAG GGGTCGATGA AAGCCGGCTG GCCCGGCATT ACGTGTTCCA CTACACGACG
GCGGCCGCGA CAGGTCCCTA CACCGTCAGC GGCCAGCTCG TAGAGATGCA GGGCGGGCCG
GGTAAACGGC CGCTTTCGGT GCCGCCCCGC CTTTTCACTT TCCGGACGTT GTCAGCAACG
CGTGCCAGAC CGTCGGCCTC GTCTGGTTCC GGTCCGTTCA CGCTGGCGGA CACCCCGCGC
CTTGCGGCAC GTCCCCTGCC GATTCAGTCC AATCACCTGG GCAACTGGTA CGTGACACTC
TGGCCCACCG CAGAGCCGGA AGGCGATCCG GTCCGCGTGG CGGCAACCAA CCCGGACGGA
TCGTTCGCCA TCGAGTACGT GCGCCCCGGC ACCTACTACC TGTGGGCGTT TTTCCTTGCG
CCCGATTTCA CAGGTCCGCT GAGTTTTAGC TTCTACGATC AGAACGAGGA CGGAACACCC
GATCCCCTGC AGATCTCCAG CAATCTTTCC GGACTGACGA TTCCGCTCAT CCGCCTCGAA
CCGCTCACAG CGCTTCAGGC GGCCCAGGTG GCCCAGATGG CGCTGGCGAG CGTAGCCCCG
GACGCCCAGA TTGTCTTTAT TCAGGGCGTA CCTGACGAAA ACGGCCGGGC GCTGAGCTGG
GGCTTTACGG CCTATTCGCC CTCACAGCAA ACGGCCTATG GCCTTTCCAC GTGGGGCACC
ACGTCGGCAG CGCCACAGAT GGCCCTGCCT TCACCGACAC CCTACGATCA GATGGCCCCG
CTGCCGCTGG ACAACATGGC GGATTCGGAC GTCATCGTAG CGGCCTATCG GAGCCGCTTT
CCGGCCGCCG GCAATACCGA GCGATTTCTG CTTCAGGCCG GCCAGCTTGC CCGCTATTTC
GACGGTCTTG GCATCCTGCC GATCACGCTG TACCCGCTGG ATCCGGAGCA GTCCATCTGG
CTCGTGCAGG AAAATCGTTC GCTGCCGACG CCCCTTGAAG GCAACCTGGA ATACAGCGCC
GCCTATGACC TGAGCGGCAA CGAGCTCGTG GCCTACGAAC CGGCCACGGC CGTCGAGGCT
CTGCAGGCTG CCTGGCAGCG GGTGGCACCC GCCAAGCGCA TCCTGCAGAG CGATGGGATT
GTTGCTTTCT CGTCGAATTC GTTCGATCCG TACAGCGGAA AGGCCTCTTA CTGGACGGTC
GATCTCGTCG CCGGTGGGCA GGCGCTGAAC CTCACGCTCA GCAACACGCT GGTGACCCGG
ATCGACACGC TGAACTGGAC CGACTGGGCG GACACGCCCA AAATTCCTTT CCCGGAGATC
ATCGACTCCG ACCAGGCGGC CGACACGGCA CGGGCGCGCA GCGCGGCCGA TTTTCTGAAC
GCGCATGACA ACGAATCGGT CTCTTCCTGG CTAGAAGGTG GCTTTCTGGC CGAGCAGTAC
GGATTGCAGG TTGATCCGAA CACACCGCTG TATGCGCTGA GGCTGGAAGC CTACCCCGGG
TGGACATCCA AACGTGCCGA GCGCCGAACC ATTGCGCAGG CGTCCGCCAC GTACTTCGTC
CACATGACCA CCGGCGCCTT TGTCGAAGCA CAGACGTTTG AACCGATCGG GCCGTTCACG
GCCCGTGCGC CGCTGCAGGC CGTCCGGGAC TCCCTGGCCG AAAACTACCC GGGGGCGGAA
CTCAAACGCA TCTTCTCGGA CGGGGTCAAT CCGGATGGCA CTGCTTCCTG GTGGACGTAC
GACGCTTATC AAAGCGACGC AAACACGCAG ATCACCGTAG CCGTCTCGGC TCCGGAGGAG
ACGTTTGCCT TCGAATTCTA TCCTTCCTCG CCGCCGACCG ATCCGGTCGC CGACTGGCCC
ACGCTGCCCG AATCGTTCAT CGACTCGGGC GAGGCGATGG CCACGGCGAT GGCCAGCGGC
GGCAGCGCGT TTCTGGAATC GCACCCCGAG GCGTGGATCA CCATGGAAGG CCGGGCCATG
CCGGACCGCT ATCCGCACCT GGAAGGACAC TTCATCTGGG AGATCATCTT CCGGGGATTT
ACATCGGGTA AACGCGCTGC CACACTCGCC CAGGAAGATT CGCTGGTGGT GCTGGTCGAT
ATGGTGACCG GCGCATTGTT AATTCCACCG GTTGTGGACG CAAACGAAAC GCTACCTGAC
GACACGCGCC TGGTGCTCCG AAGCATCTAC CCGAATCCGG CCAACCGGAC GGCGGTGGTC
GTCGTGCAGG TGCCCCGGAC CGAGCGCATC CGCCTGGTCG TCTACAACCT GCTGGGCCAG
GAGGTGGCCC GGCTGATCGA TGGCCCGGTG GCGGCTGGCG AGCACCGGCT GCGCTGGTCG
GTGAGCGCCC TGCCGGCAGG GTTGTACCTG GTGCGGCTGC AGGGCAGCGA CGGCGTGCAG
ACGTTGCCCG TCGTCGTGGC CCACTGA
 
Protein sequence
MRRLMLLLTL ALAAAAQAQD LEVVSTTPAH GSAGVDPTTA VSITFNKAIN PADSLLIFPL 
DTLLQQQLTD PSRVTFSPDG TTITFNVTHQ TNRDYTWVVH YVKGVDESRL ARHYVFHYTT
AAATGPYTVS GQLVEMQGGP GKRPLSVPPR LFTFRTLSAT RARPSASSGS GPFTLADTPR
LAARPLPIQS NHLGNWYVTL WPTAEPEGDP VRVAATNPDG SFAIEYVRPG TYYLWAFFLA
PDFTGPLSFS FYDQNEDGTP DPLQISSNLS GLTIPLIRLE PLTALQAAQV AQMALASVAP
DAQIVFIQGV PDENGRALSW GFTAYSPSQQ TAYGLSTWGT TSAAPQMALP SPTPYDQMAP
LPLDNMADSD VIVAAYRSRF PAAGNTERFL LQAGQLARYF DGLGILPITL YPLDPEQSIW
LVQENRSLPT PLEGNLEYSA AYDLSGNELV AYEPATAVEA LQAAWQRVAP AKRILQSDGI
VAFSSNSFDP YSGKASYWTV DLVAGGQALN LTLSNTLVTR IDTLNWTDWA DTPKIPFPEI
IDSDQAADTA RARSAADFLN AHDNESVSSW LEGGFLAEQY GLQVDPNTPL YALRLEAYPG
WTSKRAERRT IAQASATYFV HMTTGAFVEA QTFEPIGPFT ARAPLQAVRD SLAENYPGAE
LKRIFSDGVN PDGTASWWTY DAYQSDANTQ ITVAVSAPEE TFAFEFYPSS PPTDPVADWP
TLPESFIDSG EAMATAMASG GSAFLESHPE AWITMEGRAM PDRYPHLEGH FIWEIIFRGF
TSGKRAATLA QEDSLVVLVD MVTGALLIPP VVDANETLPD DTRLVLRSIY PNPANRTAVV
VVQVPRTERI RLVVYNLLGQ EVARLIDGPV AAGEHRLRWS VSALPAGLYL VRLQGSDGVQ
TLPVVVAH