Gene Rmar_0742 details

Gene Information

• Locus tag: Rmar_0742
• ID: 8567380
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 863001
• End bp: 863570
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 62%
• Product: 3-isopropylmalate dehydratase, small subunit
• Protein accession: YP_003290028
• Protein GI: 268316309

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.337474
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGACA TCATCCGTGG GCTGGCCTAC GTCGTAGGTG ACTCGATCGA CACCGACCAG 
ATCATTCCGG CGCAACACCT GGTCTACAGC CTGACGCGTC CCGAAGAACG GCGGCTCTAT 
GGCCGCTATG CGCTCAGCGG CGTACCGGCC GAAGGCCAGG GCCTTCCGTT CGGTAACATT 
CCGTTTACCG AGCCGGACGC CTACAAAAGC CGCTTCAAGA TCGTGGTGGC CGGCAAGAAT 
TTCGGCTGCG GTTCCTCGCG CGAGCACGCC CCGTTCGCGC TCCAGGAAGC CGGCTGCGAG 
GCCGTCGTCG CCGAAAGCTA TGCGCGCATC TTCTACCGCA ACGCCATCGA CGGCGGCTTT 
GTCGTGCCGT TCGAAACGCC GGTTCGCCTG ATCGACAAAA TCCGCACAGG CGACGAGCTG 
GAGATCGACA CGCGCCTGGC CAAGCTGACG AATCTGACCA CCGGCGAAGA ATTTCTGCTC 
CATCCACTGG GCGAAGTGGC CGAAATCCTG CGGGCGGGCA ACCTGTTCGA GTATGCCCGT 
AAGGCCGGCC TGATCCCCAC AAACGCCTGA 

 

Protein sequence

MKDIIRGLAY VVGDSIDTDQ IIPAQHLVYS LTRPEERRLY GRYALSGVPA EGQGLPFGNI 
PFTEPDAYKS RFKIVVAGKN FGCGSSREHA PFALQEAGCE AVVAESYARI FYRNAIDGGF 
VVPFETPVRL IDKIRTGDEL EIDTRLAKLT NLTTGEEFLL HPLGEVAEIL RAGNLFEYAR 
KAGLIPTNA