| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0740 |
|---|
| Symbol | |
|---|
| ID | 8567378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 859997 |
|---|
| End bp | 861610 |
|---|
| Gene Length | 1614 bp |
|---|
| Protein Length | 537 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | 2-isopropylmalate synthase |
|---|
| Protein accession | YP_003290026 |
|---|
| Protein GI | 268316307 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.33125 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACC GTATCATCAT CTTCGACACC ACGCTGCGCG ACGGCGAGCA GGCGCCGGGC
GCTTCCATGA CGATCGACGA AAAGCTGCGC ATTGCGCATC AACTGGCCCG GCTGAACGTG
GATGTCATCG AGGCTGGCTT CCCGATCTCC TCGCCGGCTC AGTTCGAAGC CGTGCAGCGC
ATCGCCGCCG AGGTGGAAGG TCCCGTCATC TGCGCGCTGG CACGGGCGCG CGAAGAGGAC
ATCCGGGCGG CCGCCGAAGC GCTCAAGCCC GGCAAACGCA CGCGCATCCA CACGTTCATT
GCCACCAGCG ACATCCACAT CGACGCGAAA TTCGGCGACG AGCGCTACGG GCGCACGCTG
GCCGAAAAGC GCCGGACGAT CCTGCGTCTG GCCGAAGAGG CCGTCCGGCT GGCCCGCACC
TTCACCGACG ACGTGGAGTT CAGCGCCGAG GATGCCGGCC GCACCGACGT GGGCTACCTG
GCCGAAGTCG TGCAGGTAGC TATCGAGGCC GGCGCTACCA CGATCAACCT GCCCGATACG
ACCGGCTACT GCGTGCCCGA CGAGTACGCG GCCATGTTCC GGGAAGTAAT CCGGCGGGTG
CAGCCGCCTC CGCACGTCAT CTTCTCGGCG CACTGCCACG ACGACCTGGG GCTGGCCGTG
GCCAACTCGC TGGCGGCCGT GCAGGCGGGC GTGCGCCAGA TCGAGTGCAC GATCAACGGC
ATCGGCGAGC GGGCCGGCAA TGCCGCCCTC GAAGAGGTCG TCATGGCGCT GAAGGTGCGT
GGCGAGCGGT TTGGTCGCCT GCAGGTGAAC ATCGTCACGC AACACCTGAC GGAAACCAGC
CGCATGGTGT CGATGGCCAC CGGCTTTCCG GTGCCGCCCA ACAAGGCCAT TGTCGGCCGC
AACGCCTTCA GCCATGAGGC CGGTATTCAC CAGCACGGCG TGCTGCGGCG GCGCGATACC
TACGAGATCA TGCGCGCCGA AGACGTGGGC CAGGAGCCCG AACAGATCCG GCTGGGACGC
CACTCGGGGC GGCACGGCCT CTTCAGCCGC CTGGCCAAAC TGGGTATCGA AGTTCCGGAG
GAGCGCAAGG AGGAAGTCTA TCGGCGCTTC CTGGCGCTGG CCGACCTGAA AAAGGAAATC
TACGACGAGG ATCTGCGCCG CCTGGTAGCG GAGCAACCGG ACGAAAACCC GGAGGCGCTC
TACCAGCTCA TGGAAATGCA CGTCGCGACC GGTACGCACC GGGCACCGGA GGCCGAGGTG
CAGATCCTCA ACCGGGCGAC CAATACGCTG CACATCGGAC GGGCCACCGG CGACGGTCCG
GTCAACGCCA TCTACAAGGC GATCGATCAG GCCGTGGGAG CCGCGCACGA GCTGGTCAGC
TACGAGCTGC GTTCGGTCAC CGAAGGGGCC GACGCCGTGG GCGAGGTGAC CGTCGTGATC
GACTTCAACG GCACGCGCTT CACGGGCGTG GCCCGGCACA CCGACGTGCT GCGCGCGTCG
GCCGACGCCT ACCTGGAGGC CATCAACCAG CTCGAGCAGT ACCGGGCCGA CCGGGAAAGC
GTCACGTTCG TACGTGCCGG TATCATGCAA TCCTTTGGCG GTGCAGCCGC CTGA
|
|---|
| Protein sequence | MSDRIIIFDT TLRDGEQAPG ASMTIDEKLR IAHQLARLNV DVIEAGFPIS SPAQFEAVQR
IAAEVEGPVI CALARAREED IRAAAEALKP GKRTRIHTFI ATSDIHIDAK FGDERYGRTL
AEKRRTILRL AEEAVRLART FTDDVEFSAE DAGRTDVGYL AEVVQVAIEA GATTINLPDT
TGYCVPDEYA AMFREVIRRV QPPPHVIFSA HCHDDLGLAV ANSLAAVQAG VRQIECTING
IGERAGNAAL EEVVMALKVR GERFGRLQVN IVTQHLTETS RMVSMATGFP VPPNKAIVGR
NAFSHEAGIH QHGVLRRRDT YEIMRAEDVG QEPEQIRLGR HSGRHGLFSR LAKLGIEVPE
ERKEEVYRRF LALADLKKEI YDEDLRRLVA EQPDENPEAL YQLMEMHVAT GTHRAPEAEV
QILNRATNTL HIGRATGDGP VNAIYKAIDQ AVGAAHELVS YELRSVTEGA DAVGEVTVVI
DFNGTRFTGV ARHTDVLRAS ADAYLEAINQ LEQYRADRES VTFVRAGIMQ SFGGAAA
|
|---|
| |