Gene Rmar_0739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0739 
Symbol 
ID8567377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp858714 
End bp859802 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content70% 
IMG OID 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_003290025 
Protein GI268316306 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.379297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGACGC CCCATTACCA TATCGTCGTA TTGCCCGGCG ACGGCATCGG GCCGGAGGTG 
ACGCGCGAGG CCGTGCGCGT GCTGGAGGCG GCCGCCGAGG CCTTTGGTTT TCGGCTGACG
ACCGAAACGC ATCCGGTGGG CGGCGCGGCC ATCGACGCGA CGGGCGACCC GTTGCCCGAG
CCGGTGCTGC AGGCCTGCCT GCAGGCCGAT GCCGTGCTGC TGGGAGCCGT CGGCGGTCCG
AAATGGGACA ACCTGGATCG GGCACAACGG CCCGAAGCCG GACTGCTGCG GCTGCGCAAG
GCGCTCGAAG CCTATGCCAA CCTGCGGCCG GTGCAGGTCC CCGAAGCGCT GGCCGACGCC
TCGCCGCTCA AGCGCGAGGT GGTGGCCGGC ACCGACCTGC TCATCGTGCG CGAGCTGACC
GGCGGCATCT ACTTCGGCGA GCCGCGCGGC CGCAACGGCC AGATGGCCTG GAATACGATG
CGCTACACGC GCGAGGAGGT GGCCCGCATC GCCCGTGTGG CCTTCGAATG GGCAAAGCGT
CGGCGCGGCC GCGTTGCCTC GGTGGACAAG GCCAACGTGC TCGAAGTGTC CCAGCTCTGG
CGCGAGGTGG TCTCCCAGGT GCATCGGGAG GAATTCCCCG AACTGGAGCT GGAGCATTTT
TACGTGGACA ATGCGGCCAT GCAGCTCGTG CGCGATCCCC GGCGGTTCGA CGTGGTGGTC
ACCGGCAACC TGTTCGGCGA CATCCTCTCG GACCTGGCCG CCACGCTGCC GGGATCGCTG
GGCATGCTGC CTTCGGCCAG CATCGGCGGG CGCGTGGGGC TGTTCGAGCC GGTGCATGGC
AGCGCCCCGG ACATTGCCGG CCAGGGCAAA GCCAATCCGC TGGCTGCGAT CCTGTCGGCC
GCCATGCTGC TGGAGACGCT CGGCCAGGAG GCCGCCGCGC GGGCCGTCCG CCAGGGCGTG
GACGCCGCGC TGGCCGAAGG CGTCAAGACG GCCGACCTGT GTCGGGCCGG TGAGACACCC
GCCTCGACCG AAGCCGTCGG TCAGTTCATT GCGGCCTACG TGCGACAGCA AACGCCGGTA
GCTTCGTAA
 
Protein sequence
METPHYHIVV LPGDGIGPEV TREAVRVLEA AAEAFGFRLT TETHPVGGAA IDATGDPLPE 
PVLQACLQAD AVLLGAVGGP KWDNLDRAQR PEAGLLRLRK ALEAYANLRP VQVPEALADA
SPLKREVVAG TDLLIVRELT GGIYFGEPRG RNGQMAWNTM RYTREEVARI ARVAFEWAKR
RRGRVASVDK ANVLEVSQLW REVVSQVHRE EFPELELEHF YVDNAAMQLV RDPRRFDVVV
TGNLFGDILS DLAATLPGSL GMLPSASIGG RVGLFEPVHG SAPDIAGQGK ANPLAAILSA
AMLLETLGQE AAARAVRQGV DAALAEGVKT ADLCRAGETP ASTEAVGQFI AAYVRQQTPV
AS