Gene Rmar_0707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0707 
Symbol 
ID8567344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp819477 
End bp820565 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content67% 
IMG OID 
ProductMammalian cell entry related domain protein 
Protein accessionYP_003289993 
Protein GI268316274 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.886561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCGCG AAGCACGGGT CGGACTGCTG GCGCTGGCGG GCATCGCGCT GTTCGTCATC 
GCACTGTTTG CGATTGCGAA CCGCTCGTTT CTGCTGAGCG ACACGTTTCT GCTGCGCGCC
CGTTTCAACC GGGTGGCCGG GCTGGTACCC GGAGCGCCCG TACAGTTTCA GGGCGTGAAC
GTGGGGCGCG TCGAGTCGGT GCAACTGCCG CCGGAGCCGG GCGGACAGAT CGAAGTGACG
ATGGCGATCA AGGAAGAAGC CCGGCGTGTG ATCCACGTGC GCACGCAGGC GCAGATCAAA
AGCGAGGGGC TGGTCGGTCA GCAGATCGTC GTGCTGGTCA ATCCGCCGGG CGTGCAGGGC
GAGCCGGTTT CGGAGGGCGA CCTGATCGTG GGGGTCGATC CGTTCGACCT GTTCGAGATC
ACGGACCGGG CGCTGGCCTC GGTGCAGCGC TTCGAGGACG CGGCCAACGC CTTCCGTCAG
ATCATGCTCG ACGTGCGGGC CGGCGAGGGC ACGCTGGGCA AGCTGATCTA CGATCCGACG
CTCTACGACG AATTCGTGGC CACCACGAAC GAGACGCGGC GCGTGCTGAA CAACCTGGCG
AACAACGCCG AGGCACTGGT GGCGCTGGCC GAAGAGGCCA CCCAGGGCGT GCAGTCGATC
CTGGACAAGA TCGACCGGGG CGAGGGTACG ATGGCCCGGA TGCTGAACGA CCCGGCGCTT
TACGAGCGGC TGCTGGCTAC GGCCGATACG CTCCGGCTGG TGGCTTCCGA CCTGCGGGCC
ATCACAGGTG CCGCGGAAAA CGCGGCCAAC TGGGGGGCGC TGGGGGCTTA TCGGTTCGCC
GAGCTGATGG AAGCGGCCAA GCACAACTGG CTCTTCCGGC GCTACTTCGA GGAGCGCGGT
TACATGGAGC GGGCACCTTT CGAGGTGCGG GAGCGGGCCA TCGAACAGGC CTACCGGCAA
CTTCAGGCCC GCATGCGTGA ACTGGACGCC TGGGAACGAC AATTGCAGGA ACGCGAAGCC
CGGCTGAAGG CGCTGGAAAC GCGCCTGTCG GCCCTGGCCG ACTCGCTGGC CGGCACCGAT
GGACGTTGA
 
Protein sequence
MSREARVGLL ALAGIALFVI ALFAIANRSF LLSDTFLLRA RFNRVAGLVP GAPVQFQGVN 
VGRVESVQLP PEPGGQIEVT MAIKEEARRV IHVRTQAQIK SEGLVGQQIV VLVNPPGVQG
EPVSEGDLIV GVDPFDLFEI TDRALASVQR FEDAANAFRQ IMLDVRAGEG TLGKLIYDPT
LYDEFVATTN ETRRVLNNLA NNAEALVALA EEATQGVQSI LDKIDRGEGT MARMLNDPAL
YERLLATADT LRLVASDLRA ITGAAENAAN WGALGAYRFA ELMEAAKHNW LFRRYFEERG
YMERAPFEVR ERAIEQAYRQ LQARMRELDA WERQLQEREA RLKALETRLS ALADSLAGTD
GR