Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0707 |
Symbol | |
ID | 8567344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 819477 |
End bp | 820565 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | Mammalian cell entry related domain protein |
Protein accession | YP_003289993 |
Protein GI | 268316274 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.886561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGCGCG AAGCACGGGT CGGACTGCTG GCGCTGGCGG GCATCGCGCT GTTCGTCATC GCACTGTTTG CGATTGCGAA CCGCTCGTTT CTGCTGAGCG ACACGTTTCT GCTGCGCGCC CGTTTCAACC GGGTGGCCGG GCTGGTACCC GGAGCGCCCG TACAGTTTCA GGGCGTGAAC GTGGGGCGCG TCGAGTCGGT GCAACTGCCG CCGGAGCCGG GCGGACAGAT CGAAGTGACG ATGGCGATCA AGGAAGAAGC CCGGCGTGTG ATCCACGTGC GCACGCAGGC GCAGATCAAA AGCGAGGGGC TGGTCGGTCA GCAGATCGTC GTGCTGGTCA ATCCGCCGGG CGTGCAGGGC GAGCCGGTTT CGGAGGGCGA CCTGATCGTG GGGGTCGATC CGTTCGACCT GTTCGAGATC ACGGACCGGG CGCTGGCCTC GGTGCAGCGC TTCGAGGACG CGGCCAACGC CTTCCGTCAG ATCATGCTCG ACGTGCGGGC CGGCGAGGGC ACGCTGGGCA AGCTGATCTA CGATCCGACG CTCTACGACG AATTCGTGGC CACCACGAAC GAGACGCGGC GCGTGCTGAA CAACCTGGCG AACAACGCCG AGGCACTGGT GGCGCTGGCC GAAGAGGCCA CCCAGGGCGT GCAGTCGATC CTGGACAAGA TCGACCGGGG CGAGGGTACG ATGGCCCGGA TGCTGAACGA CCCGGCGCTT TACGAGCGGC TGCTGGCTAC GGCCGATACG CTCCGGCTGG TGGCTTCCGA CCTGCGGGCC ATCACAGGTG CCGCGGAAAA CGCGGCCAAC TGGGGGGCGC TGGGGGCTTA TCGGTTCGCC GAGCTGATGG AAGCGGCCAA GCACAACTGG CTCTTCCGGC GCTACTTCGA GGAGCGCGGT TACATGGAGC GGGCACCTTT CGAGGTGCGG GAGCGGGCCA TCGAACAGGC CTACCGGCAA CTTCAGGCCC GCATGCGTGA ACTGGACGCC TGGGAACGAC AATTGCAGGA ACGCGAAGCC CGGCTGAAGG CGCTGGAAAC GCGCCTGTCG GCCCTGGCCG ACTCGCTGGC CGGCACCGAT GGACGTTGA
|
Protein sequence | MSREARVGLL ALAGIALFVI ALFAIANRSF LLSDTFLLRA RFNRVAGLVP GAPVQFQGVN VGRVESVQLP PEPGGQIEVT MAIKEEARRV IHVRTQAQIK SEGLVGQQIV VLVNPPGVQG EPVSEGDLIV GVDPFDLFEI TDRALASVQR FEDAANAFRQ IMLDVRAGEG TLGKLIYDPT LYDEFVATTN ETRRVLNNLA NNAEALVALA EEATQGVQSI LDKIDRGEGT MARMLNDPAL YERLLATADT LRLVASDLRA ITGAAENAAN WGALGAYRFA ELMEAAKHNW LFRRYFEERG YMERAPFEVR ERAIEQAYRQ LQARMRELDA WERQLQEREA RLKALETRLS ALADSLAGTD GR
|
| |