Gene Rmar_0653 details

Gene Information

• Locus tag: Rmar_0653
• ID: 8567289
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 746895
• End bp: 748922
• Gene Length: 2028 bp
• Protein Length: 675 aa
• Translation table: 11
• GC content: 67%
• Product: TonB-dependent receptor
• Protein accession: YP_003289939
• Protein GI: 268316220

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCACGG TGATTTTACT GAGCGGGCTC CTGCTGCTGG GACTGAGCCG GGGGCTGCAG 
GCCCAGGAGG TCCCGTTGAT CGAGGCCCGG CTCGACTCGG TGGTGATCAC CGCGCACTTC 
GAGCCGACGC CGCTGCACGA GGCGGTGCAG CCGGTGCGGG TGATCTCGGC GCGGCGGATT 
CAATTGCAGG GGGCCTCGCA CCTGCAGGCG CTGCTCTATC AGGTGCCCCA GCTCGGGGTC 
ATGCAGCACC AGGTGCTGGG CGGGGCGCCC GAGATGCAGG GGCTGGGCCC CCAGCATGTG 
GCCGTGCTGG TCGATGGCGT GCCGGTGACG GGGCGGATCG ACGGCCGGCT CGACATGGCC 
CAGATGCTGC TGAGTAACGT AGCCCGGGTT GAGATCGTCG AAGGGCCGTC GTCCGTCTTT 
TACGGCTCGC ATGCGCTGGG CGGCGTCATC AACCTGATCA CACGTTCCGG CCGGCAGTGG 
CCCGAAGGTC CTTCGGTGGC GCTGCGCAGC TATGCCGAGA GCGTGGGGAG CTGGGACAAC 
AGCCTGGACC TTCGTTACCG ACGCGGTTCG TTCTGGGCCG GGCTGCAGAT CGGACGCCAT 
GCCTTCGACG GTTATCTCGG GGGCGACGAC GTGACGCGGG CGGCCGACTG GCCCGAGCGC 
CGACAGCGCT TTCTGCTCCC TGCTGTGGGC TGGGAGGGGC GTCGGGGGCG GTTGACCTAC 
AGTGCGCAGT TCTTTGACGA AACGCTCACC GAACAGGGCG AGCCCGACGC CGAGGGCTTC 
GCACAGGACA ACGAATACCG GAGTCGGCGC ATAAGGCATA CGCTCACCTA CTCCCACTGG 
TGGGCCGGGC GGTACCTGCA CCTGACGGGA AGCTGGAGCC ACTACGATCG CCGAATTGTA 
CCCTTCGTGG TGCAGACGCA GACCGGAAGC CGCACGCGCC AGACCGAGGC GATCGACACC 
ACGGTCTACC GGCAGGGCTT CGTGCGCGGG CATTACCTGC ACCATCTGGG CGCGACCGGC 
CTCCAGCTCT TCGGCGGCGG CGAGGTGTGG ATCGAGCAGA TCGAAGGCGC CCGCATTGCC 
TCGGGAAGCC GACAACTTGG CACCTATGCG CTCTTTGGCG GCCTGCTGTA CCGGACCGGC 
GCAGTGCAGG TGCGCCCGGC TTTTCGCTAC GCGTTCAACG ACGAGGGGCA GGCGCTGCTG 
ACGCCCGCGT TGAACGTGCG CGTCGATCTG GGCAAGGCCC ACACCTGGCG GCTGACGCTG 
GCGCAGGGCT TCCGGGCCCC GTCGCTGAAA GAACGTTATC TGGACTACTG GATGACCATC 
GGTCCCAGCA CCTATCACAT CACCGGCACG CCCGATCTGA AGCCGGAGGT CTCCTGGCAT 
ATCGGCCTTC GGTACGACTA CCGGCGCGTG CTGGGTAGCG TGCGGCTGGA ACTGGAGACC 
GCGGCCTTCC TCAACAACGT GCGGGACCTG ATTGCGCTCA GTCCGCTGGT GCAGAACGAG 
CAGGGCATCT GGACCCGGCA TTACGAGAAC GTGCAGCGGT ACCGGACGCG GGGCGGCACG 
TTCACGCTGC GTCTCCGCCA TCGAGGGCTG CACTTCTGGG CGACGGTCGC CCCGCTGTGG 
CGCTACGTGG AACTGTCGGA GTCGTACCCC GAGGCGCCGC GCTACGAATT GACCACGGAC 
CTGCTGGGTG GCGTGGAGGT GCAGTTGCCC GGGCAGGTGC AGGGACTGCT TCTGTACCAT 
TACGGCGGCA GCCGGACGGT CTATTACACC GTGCGCGATC GCGCCACCGG TCAGACGCTC 
CTGCAGCAGG CCGCGGTGCC GGATTATCAC CTGCTGGATC TGGCCCTGCA ACGCGCCTTC 
TGGCGACAGC GCCTCTGGCT CACGGCCGGG GTCAGGAACG TGCTGGACGT GACCAACCTG 
GGCCAGACCG TCTGGGACAC CCGCCGCGCC CACCAGCGCA ACCTGTTTCT CTACGGCCGC 
ACGGCTTACG TGCAGCTCCG GCTCATGCTG GGCGGCCGGC AGCAATAA 

 

Protein sequence

MRTVILLSGL LLLGLSRGLQ AQEVPLIEAR LDSVVITAHF EPTPLHEAVQ PVRVISARRI 
QLQGASHLQA LLYQVPQLGV MQHQVLGGAP EMQGLGPQHV AVLVDGVPVT GRIDGRLDMA 
QMLLSNVARV EIVEGPSSVF YGSHALGGVI NLITRSGRQW PEGPSVALRS YAESVGSWDN 
SLDLRYRRGS FWAGLQIGRH AFDGYLGGDD VTRAADWPER RQRFLLPAVG WEGRRGRLTY 
SAQFFDETLT EQGEPDAEGF AQDNEYRSRR IRHTLTYSHW WAGRYLHLTG SWSHYDRRIV 
PFVVQTQTGS RTRQTEAIDT TVYRQGFVRG HYLHHLGATG LQLFGGGEVW IEQIEGARIA 
SGSRQLGTYA LFGGLLYRTG AVQVRPAFRY AFNDEGQALL TPALNVRVDL GKAHTWRLTL 
AQGFRAPSLK ERYLDYWMTI GPSTYHITGT PDLKPEVSWH IGLRYDYRRV LGSVRLELET 
AAFLNNVRDL IALSPLVQNE QGIWTRHYEN VQRYRTRGGT FTLRLRHRGL HFWATVAPLW 
RYVELSESYP EAPRYELTTD LLGGVEVQLP GQVQGLLLYH YGGSRTVYYT VRDRATGQTL 
LQQAAVPDYH LLDLALQRAF WRQRLWLTAG VRNVLDVTNL GQTVWDTRRA HQRNLFLYGR 
TAYVQLRLML GGRQQ