Gene Rmar_0643 details

Gene Information

• Locus tag: Rmar_0643
• ID: 8567279
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 727793
• End bp: 731350
• Gene Length: 3558 bp
• Protein Length: 1185 aa
• Translation table: 11
• GC content: 68%
• Product: chromosome segregation protein SMC
• Protein accession: YP_003289930
• Protein GI: 268316211

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.126357
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACCTGA GCAAGCTCGA ACTGCAAGGC TTCAAGAGTT TCGCGGACCG GACGGTCCTG 
CACTTCGATC CCGGTATCAC GGCCATCGTC GGCCCCAACG GCTGCGGCAA GTCGAACCTG 
GTCGATGCCG TCCGCTGGGT CATCGGCGAG CAGCGTGCCC GCGTGCTCCG CTCCGAACGC 
ATGGAGCACG TGATCTTCAA CGGCACGGCC CGCCGCCGCC CCGTCGGCAT GGCCGAGGTA 
CTGCTGACCA TCGAAAACAC GCGGGGCATC CTGCCGCTCC ACTACAGCGA AGTCACCATC 
GGCCGCCGCC TCTACCGCTC CGGCGAGTCC GAGTACCTGC TCAACGGCAC CCCCTGCCGC 
CTGCGCGACA TCCAGGAGCT GTTCATGGAT ACAGGCATGG GGGCCGGCGC CTACTCGGTC 
ATCGAGCTGA AAATGATCGA GGACATCCTC TCGGACAATG CCCAGGACCG ACGTCATCTT 
TTCGAGGAGG CGGCCGGAAT CACCCGCTAC AAGCTGCGCC GCACGCAGAC GCTCCGTAAG 
CTCGACGCCA CGCGCGGCGA CCTGACCCGC CTGCGCGACC TGATCGAAGA GGTCCGGCGC 
CAGGTCGATA CGCTCAAACG CCAGGCCGAC CGCGCCGAAC GTTTCCGCCG CTACCGCGAC 
GAACTGCGCG CGCTCGAACA GGCGCTCCTG CGCCACGACT ACGACCGGCT GCGCGAACAA 
GCCGACGCGC TCGAAGCTCT GCTGGACGAG GTGCAGACGC GCCTGCGCGA AGCCCGCACC 
CGCTACGAAA CGCTCGAAGC GGAACAGACC GAACTGCAGC AGCAGCTCAC GCAGACCGAA 
ACGGCGCTGG AGGCCGCGCA GGAACGCCTG CACGCGCTCC AGAATCGCCT GCAGGCGCTC 
GATAGCGAAG GCCGCCTGCT GGACGAGCGC CTGCAGGCCG CCCGAAGCGA ACAGGAACGG 
CTGCAGCGCG AAGCGAAAGA GGCCGAACAC CAGGAACAGC GCCTGCGGCA GGCGCTGGAA 
GCCGCCGAGA CGGCCGTCCG GGAAGCCATG CCCCGGCACG AAGCGGCCGA GGCCGCCCTG 
CGCCAGGCCC TGGAGGCCCG AGACGCCGCC CAGCACGCGC TGGAGCAGCA GCGAGAGCGC 
GTCCGCGAAG CCCGTCGCCT GCTGCAACAG GCCGAACAGA CCCTGCACGA AGCGCGCCGC 
CAGCTCGACC GCCAGAGCAA CCGGCGCGAA CTGCTGGAAC AGGAACGCGA ACGCCTCGAC 
GCCGAACAGA AGACGCTCGA CGCGCAGCTG CAGACGCTCG AAACCGAGCA GGAAGAAACC 
CTCCGGAAAC GCAAGACCGC GCGCCAGACG TGCGAACGGC TTCGGAAGGA AATCGAAGCG 
CTGGAGGCCC GCCGACAGGC GTTGCGTCAG GAGATCGCCG CCCGCAACGA AGCGCTGCAC 
CGACGGGAAC GGCGGCTGGA GGCCGTGCAG GCCGAAGCGC GATTGCTAGA ACAGGTGCTC 
ACGGCCTACG AGGACTTTCC GGAGGCCGTC CCCTTCCTGG CTCGCACCTC AGGCTGGACG 
GAAGCACCGC TGCAGACCGT GGCCGACCTG CTCGGCATCG CGCCCGAGCT GCAACCGGCC 
CTCGACACGG CGCTCGGCGA GCGGGCCGCC TGGATCGTCG TGGCTACCGA AGAGGAAGCC 
CGACAGGCAC TCCGGTTGCT CCGCGAGGCG GAAAAAGGCC GGGCCACCTT CATCGTGCTG 
GACGGGTTGA CGCCTCCGAA CGATCCACCC GAGATCCCCG ACGCCCGTCC CCTTCTCGAT 
CACGTGCGGC TGGCCCGTCC CGAACTGCGA CCGCTGGCCG CCTCACTGTT GCACGACGCC 
TATCTGGTCG ATGACCTAGA GACGGCCCGC CGTCTGGCCC GGAGCACTTC GGCGCCGACC 
CGCTTCTTCA CGCCACAGGG CGAGTGGATC GACAGCCGGA ACTGGTGGCA CGGCGGCAGC 
ATGCAGGCGC CGCGCTCGCC CCTCAGCGGC CGCCTCGACC GTCGCGAGCG ACTGAACGCC 
CTTCAGACCG AGGCCGCCTC GCTGGAAACG GAGATCGCCC GCCTGCGCGA CGAGCGCGCC 
ACGCTGGAAC AGCAACTGCA GGCGCTTCCC TTCGACACCC GGCGGCAGGC CCTGCGCGAG 
GCCGAGCAGG CGCTGCGCAC GCTGGAGCAA CAGGCCACCC GCCACGAGGC CACGCGCGAG 
TCGCTTCGCC AGCGCCTCGA AGCCCTGAAA ACCCGCCGGA CGCAACTGGA CGAAGCACAG 
GCGACCCTTG CGGCCGAACT GCAGACGCTC CGGCAAACGC TGATGGAAGC CGAGCAGACG 
GTGGCCGAGC GCCAGCGTGC GCTGCAGGAG GCCGAAGCCG CCCTTCAGCA GGCAGAAGCC 
GACTACCGGG CCACCATGGA GCAGCTGAAC CAGGTGCAAT TGCAGGCGGC CGAAACGCGC 
AACCGGCTGG ACAACCTCCG ACGCGAGCAG CAACAGCTTC GCCAGCGGCT GGAAGGTCTC 
CAGCGTCGCC AGCAGGAACG CGCGCAGCAG CAGAAGCAGC TGGCAACGCG CCTGGCACAG 
GACCAGGAGC GACGCCGGAC TATCGAAGCA GAGCGAAACG CCCGCAGCGC CGAACTGCCT 
CCTGCCGAGG CTGAAGTGCA GCGGCTCCGT CAGCAGCTCG TCGCGCTCCG CACGGCCTTC 
GAGCGCGCCG AGCGTCAGCT GCGCGACCTC CGCCGCGCCT ACGAGCAGGA GCAGCAGCAG 
GAACGTCAGT ATCAGGTGCA ACTAGCCGAA ACGCGCACGC GCCTGACCGC CCTGGCCGAG 
CATGCCCGCG AACATCTGGA CGTGGACGAT CCCTCCCGCC TGCCCGAACC GCCGGCCGAC 
TTCGACGTGC AGCAAACGCG GGAGCAGATC GAAACGCTAC GCCGCCGGAT GGCCAACCTC 
GGCACCGTCA ACGAACTGGC ACTCGAACAG TATCAAGAAG AAAAGGAACG GCTCGACTTT 
CTGCTGACCC AGCAGCAGGA TCTGGAATCG GCCGAGGCCA CGCTGGAAAC CACCATTCAG 
GAGATCAACC AGACGGCCGC CGCCCGCTTT CTGGAGACCT TCGAAACGAT CCGTCGCAAC 
TTTCAGGAAC TGTTCCGCGA ACTGTTCGGC GGCGACGCCC GGGCCGATCT CGTGCTGGCC 
GACCCGAACG ATCCGCTGGA GTCGCCCATC GAGATTCTGG CGCGTCCCCG CGGCAAGCGT 
CCCAGCACGC TCGCCCAGCT CTCCGGGGGT GAAAAGGCCC TGACGGCCAT TGCCCTGCTT 
TTTGCGCTGT ATCTGACCAA ACCCAGCCCG TTCTGCATTC TCGACGAAGT GGACGCGCCG 
CTGGACGAAG CCAACGTCGA GCGCTTCATG CGCCTGCTGC GCAGCTTTTC TGAAAACACC 
CAGTTCATCC TCATCACGCA CAACCTGCGC ACGATGGAGC TGTCGGACCG GCTCTACGGC 
GTCACGATGC AGGAGCCGGG CGTTTCGACG CTGGTCAGCG TCCGCCTCGA AGAAGCGGCC 
GAGCTGGCCG GACGCTGA 

 

Protein sequence

MYLSKLELQG FKSFADRTVL HFDPGITAIV GPNGCGKSNL VDAVRWVIGE QRARVLRSER 
MEHVIFNGTA RRRPVGMAEV LLTIENTRGI LPLHYSEVTI GRRLYRSGES EYLLNGTPCR 
LRDIQELFMD TGMGAGAYSV IELKMIEDIL SDNAQDRRHL FEEAAGITRY KLRRTQTLRK 
LDATRGDLTR LRDLIEEVRR QVDTLKRQAD RAERFRRYRD ELRALEQALL RHDYDRLREQ 
ADALEALLDE VQTRLREART RYETLEAEQT ELQQQLTQTE TALEAAQERL HALQNRLQAL 
DSEGRLLDER LQAARSEQER LQREAKEAEH QEQRLRQALE AAETAVREAM PRHEAAEAAL 
RQALEARDAA QHALEQQRER VREARRLLQQ AEQTLHEARR QLDRQSNRRE LLEQERERLD 
AEQKTLDAQL QTLETEQEET LRKRKTARQT CERLRKEIEA LEARRQALRQ EIAARNEALH 
RRERRLEAVQ AEARLLEQVL TAYEDFPEAV PFLARTSGWT EAPLQTVADL LGIAPELQPA 
LDTALGERAA WIVVATEEEA RQALRLLREA EKGRATFIVL DGLTPPNDPP EIPDARPLLD 
HVRLARPELR PLAASLLHDA YLVDDLETAR RLARSTSAPT RFFTPQGEWI DSRNWWHGGS 
MQAPRSPLSG RLDRRERLNA LQTEAASLET EIARLRDERA TLEQQLQALP FDTRRQALRE 
AEQALRTLEQ QATRHEATRE SLRQRLEALK TRRTQLDEAQ ATLAAELQTL RQTLMEAEQT 
VAERQRALQE AEAALQQAEA DYRATMEQLN QVQLQAAETR NRLDNLRREQ QQLRQRLEGL 
QRRQQERAQQ QKQLATRLAQ DQERRRTIEA ERNARSAELP PAEAEVQRLR QQLVALRTAF 
ERAERQLRDL RRAYEQEQQQ ERQYQVQLAE TRTRLTALAE HAREHLDVDD PSRLPEPPAD 
FDVQQTREQI ETLRRRMANL GTVNELALEQ YQEEKERLDF LLTQQQDLES AEATLETTIQ 
EINQTAAARF LETFETIRRN FQELFRELFG GDARADLVLA DPNDPLESPI EILARPRGKR 
PSTLAQLSGG EKALTAIALL FALYLTKPSP FCILDEVDAP LDEANVERFM RLLRSFSENT 
QFILITHNLR TMELSDRLYG VTMQEPGVST LVSVRLEEAA ELAGR