Gene Rmar_0540 details

Gene Information

• Locus tag: Rmar_0540
• ID: 8567174
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 613209
• End bp: 613967
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 67%
• Product: lipolytic protein G-D-S-L family
• Protein accession: YP_003289829
• Protein GI: 268316110

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.621057
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACAGAT TCGACCTCCT TATAACCGGT CTGACCGATT CGGTTCTGAA ACTGCTCCTT 
TTGCCGCTGC TCATGCTGCT GGCCGCCTGC GGCGGCGCGC CTGAACCGCC CCGATCTGAA 
GCTTCGCCTG ATACGACGGC CCCGGCCGTC CGCAACACCG CCCGCGCGGA GCGCACGATC 
AACGTGCTCG TGCTGGGCAA CAGTCTGGCC GCCGGCTACG GTCTGTCGCC TGACGAAGCC 
TTTCCGGCCG TGTTGCAGCG CAAAGTGGAT TCGCTGGGAT GGCCCGTGCG CATCATCAAC 
GCCGGGCTGA GCGGCGAGAC CTCGGCCGGT GGCCTGCGCC GCATCGAGTG GCTGCTCCGC 
GAACGCATCG ACGTGCTCAT TCTGGAACTG GGCGCCAACG ACGGGCTGCG CGGCATCGAC 
CCCGAAGTGA CGCGCCGCAA CCTGCAGGGC ATCATCGACA AAGTGCGCGC CCGCTATCCG 
GACGCCGACA TCATCCTGGC CGGCATGCAA CTGCCCCCGA ACCTGGGCCC CGACTACACG 
GCCGCCTTCC GCGCCATCTA TCCTGAACTG GCCCGCGCCA ACGACGCCCA TCTGATTCCC 
TTCCTGCTCG AAGGCGTCGG AGGCGTGCCC GAGCTCAACC AGGCCGACGG CATTCATCCC 
ACGGCCGAAG GTCAGCGCAT CGTGGCCGAA AACGTCTGGC GCGTGCTGCG CCCCGTGCTG 
GAGCGACAGC TTTCGCGGCC GACTCGAAAC GCATCGTGA 

 

Protein sequence

MYRFDLLITG LTDSVLKLLL LPLLMLLAAC GGAPEPPRSE ASPDTTAPAV RNTARAERTI 
NVLVLGNSLA AGYGLSPDEA FPAVLQRKVD SLGWPVRIIN AGLSGETSAG GLRRIEWLLR 
ERIDVLILEL GANDGLRGID PEVTRRNLQG IIDKVRARYP DADIILAGMQ LPPNLGPDYT 
AAFRAIYPEL ARANDAHLIP FLLEGVGGVP ELNQADGIHP TAEGQRIVAE NVWRVLRPVL 
ERQLSRPTRN AS