Gene Rmar_0496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0496 
Symbol 
ID8567130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand+ 
Start bp555077 
End bp555733 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content63% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003289786 
Protein GI268316067 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.50739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTCA AACGTGCAAG TCTGGCCGAT CGGGCCTACG AAGCGCTGGA GCACCGCATC 
GTAACGCTGC AACTGGCTCC GGGCACGATC GTCACTGAAA AGGAACTGAT CCGGGAAGTC 
GGTCTGGGTC GCACGCCGCT TCGGGAAGCG GTGCTCCGGC TGGCGCAGGA GCAGCTGGTG 
ACCGTACTGC CCCGCAAGGG CATCTACATT GCGGAAATCA ACCTGACCGA TCAGCTGGCC 
GCGCTGGAGG TGCGGCGGGA GCTGGACCGG CTGATGGCAA GGCGGGCGGC CCGCCTGGCA 
CGTCCGCAGG AGCGGGTCCA GTTTGCGGAG CTGGCGCAAT CCATGCGCAA CCTGGGGGAA 
GAAGATCTGG ATCTGTTCAT GCATCTGGAT CGTCTGTTCG ACCGGCTGGT CGAGAAGGCC 
TGCCACAACC GGTTTGCTGT GCGGGCGGCG GCGCCGCTGC ACACGCTGGG CCGGCGTTTC 
TGGTATGCCT ATCACCATGA AGGCGATCTG GAGGCGTCCA TTCAACTGCA TGCGCATTTG 
ATGGAACAGA TCGCCAAGGG CGATGCGGAA GCGGCCGAGG CGGCGGCCGT CGAGCTGATA 
GACGCCATGA TAGGCTTTAC GCAGCGTGTT CTGCAACAAA CGATCGAACC CCGATGA
 
Protein sequence
MNVKRASLAD RAYEALEHRI VTLQLAPGTI VTEKELIREV GLGRTPLREA VLRLAQEQLV 
TVLPRKGIYI AEINLTDQLA ALEVRRELDR LMARRAARLA RPQERVQFAE LAQSMRNLGE 
EDLDLFMHLD RLFDRLVEKA CHNRFAVRAA APLHTLGRRF WYAYHHEGDL EASIQLHAHL 
MEQIAKGDAE AAEAAAVELI DAMIGFTQRV LQQTIEPR