Gene Rmar_0487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0487 
Symbol 
ID8567121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp539206 
End bp539634 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content65% 
IMG OID 
ProductCRISPR-associated protein Cas2 
Protein accessionYP_003289777 
Protein GI268316058 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0293549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATGA CGATCGCCGT GACCCGTAAC ACGCCTGGCC GCTTTCGGGG CTTTCTGGCT 
TCCTGCATGC TGGAAATAGC ACCGGGCGTG TATGTGGCGC CCCGGATGCC CCGGGATGTG
CGTGAGCGGG TCTGGCAGGT CCTGCTGTCC TGGGCCGAGT TGATTCCGCC GGATGGGGGT
GTGGTGCTGC TCTGGCGCAA TCGCAAAGCG CCTTCTGGCC TGGATGTGCG GCTACTGGGC
TGGCCCAAAA AGGAGCTGGT GGAGTACGAA GGAGTGTGGC TGGCGTGGCG TGGGTTGACG
GCGGCGCACG ACGTGGAGGA GCTTGCTCGA CTGGTGGAGG CCGAGGAGCC GCCGCTTGAG
GCGGGAGATC CGATCCTGCG GCTGGTGGAA AGACCGGACC TGGACGAAGA GGAGGGATCG
TCTCTCTAA
 
Protein sequence
MAMTIAVTRN TPGRFRGFLA SCMLEIAPGV YVAPRMPRDV RERVWQVLLS WAELIPPDGG 
VVLLWRNRKA PSGLDVRLLG WPKKELVEYE GVWLAWRGLT AAHDVEELAR LVEAEEPPLE
AGDPILRLVE RPDLDEEEGS SL