Gene Rmar_0467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0467 
Symbol 
ID8567101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp511739 
End bp512881 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content66% 
IMG OID 
ProductMannan endo-1,4-beta-mannosidase 
Protein accessionYP_003289757 
Protein GI268316038 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.450137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCGCA CGCTGTTGCT GCTCGGACTG CTCCTGCTCG GCTGTAATGC GGCCGATTCG 
CAGCCGTCCG TCGCCCCCTC CGATCCGGAC GCCACCCCGG AAACACGCGC GCTCTTTCAC
AACCTGTACC GTCTGGCCCC CCGCGCCATC CTCTACGGCC ATCAGGACGA CCTGGCCTAC
GGCGTCTCCT GGTGGGCCGA ACCCGGCCGC TCCGACGTGA AAGCAGTGAC CGGCTCCTAT
CCGGCCGTCT ACGGCTGGGA CGTGGGCGAC CTGGAACACG GGGCCGAACG CAACCTCGAC
GGCGTGCGCT TCGACGACAT GCGCCGCTGG ATCATCGAAG GCTTCCAGCG CGGCGGCGTC
ATCACGATCA GCTGGCACAT GGACAACCCG GTCAGCGGCG GCAACGCCTG GGACACCACG
CGGGCGGTCG ATGCCATCCT GCCCGGCGGC CCGCAACACG CCCTGTTCCG GAGCTGGCTG
GACCGCTTCG CCGACTTCGT CCGCACGCTC CGGGGCGTAC CGCCCGGCCG CACCGACACC
GTCGCCATCC CCATCATCTT CCGCCCTTAC CACGAGTGGA CCGGTAGCTG GTTCTGGTGG
GGGCGCGGCC ACTGCACCCC GGACGAATTC ATCCAGCTCT GGCGTTTTAC CGTCGATTAC
CTGCGCCGGG AAAAGGGCCT GCACAACCTG CTCCTGGCCT ACTCCTCCGA TCGCTTCCAC
TCGCCCGAGG ATTACCTGGA ACGCTACCCC GGCGACGACT ACGTGGACCT GCTGGGCTTC
GACGACTACC ACTCCCACAA AAGCGAGGAA ACGCTCCCCT TCCTGATCCG TGAGCTGCAC
GACGTGGTTC GCATGGCCCG GGCGCGCGGC AAACTGGCCG CCCTGACCGA AACCGGCTAC
GAAGCCATTC CCGACAGCAC CTGGTGGACA GGCAAACTGC TCCGGGCGCT CGATCACGAC
GACACGACGC GCCAGATCAT CTACGTGCTC ACCTGGCGCA ACGCCTACAA CCGACCCGGA
CACTACTTCG CCCCCTATCC CGGTCATCCC AGCGCCGAGG ACTTTCGTCG CTTCAAGGCC
CACCCGCTCA TTTACTTCGA AGACGAACTG CCCGACCTGT ACCGCCTGGA AAACGGCCGT
TGA
 
Protein sequence
MLRTLLLLGL LLLGCNAADS QPSVAPSDPD ATPETRALFH NLYRLAPRAI LYGHQDDLAY 
GVSWWAEPGR SDVKAVTGSY PAVYGWDVGD LEHGAERNLD GVRFDDMRRW IIEGFQRGGV
ITISWHMDNP VSGGNAWDTT RAVDAILPGG PQHALFRSWL DRFADFVRTL RGVPPGRTDT
VAIPIIFRPY HEWTGSWFWW GRGHCTPDEF IQLWRFTVDY LRREKGLHNL LLAYSSDRFH
SPEDYLERYP GDDYVDLLGF DDYHSHKSEE TLPFLIRELH DVVRMARARG KLAALTETGY
EAIPDSTWWT GKLLRALDHD DTTRQIIYVL TWRNAYNRPG HYFAPYPGHP SAEDFRRFKA
HPLIYFEDEL PDLYRLENGR