Gene Rmar_0440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0440 
Symbol 
ID8567074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp485282 
End bp486016 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content70% 
IMG OID 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_003289730 
Protein GI268316011 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0275191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTAC TGATCGGACT TGCGCTGCTG CTGTTGCTGC TTGCCGACGA CGGCGCCCGC 
CAGGGCCGCC GGGGCAACGC GGCCTACCGG GCCGGACGCT ACGCCGAGGC GGCCGAGCAT 
TACCGCCAGG GATTGCTGCT GACGCAGGAT CCAGCCACGC GCTTCGGGCT GCAGCACAAC 
CTGGGGGCGG CCCTGCTGCG TCTGGGCCAG GCGGGAAGCG CACGTGCCGC TCTCGACGCG 
GCGCTCCGCA TGGCCCCCGA CGATGCCGCA CGGGCACGCG CCGCCTACAA CGCCGGCAAC 
GCGGCCTTCG CCGAGGGCGA CCTGCAGGCG GCCCTGCACT ACTACCGCAC GGCGCTGCTG 
GCCGACCCCG ACTTCGAAGA TGCCCGCTTC AACTACGAAT ACGTCCTGCG CCACCTGCCG 
CCTTCCAGTC CACCGCCACC GTCGGTAGGC GGGGCCGAAC AGAACAATCC GAACGACGCC 
GACACGCAGA ATACACCCGG ACAGGGTGTG GCGGACGGCA ACCGCCGGCA CAATGCGGAG 
CGTGCGCCTG CGCAGAACGA CCCGTCCGAT TCCGCCGCCT CTGAAAGACA ATCCCAGACA 
CCCACCTCAT CGGCGCAGCT CTCGCCCGAG GCGGCCGCCC GCCTGCTCGA CGCCCTGCAA 
CGCCAGGAAC AGGAGGCCCT CCGGCGTGCC CTGCGGCTGC CCACCCATCC CCGTACGGTC 
AAAAAAGACT GGTGA
 
Protein sequence
MRLLIGLALL LLLLADDGAR QGRRGNAAYR AGRYAEAAEH YRQGLLLTQD PATRFGLQHN 
LGAALLRLGQ AGSARAALDA ALRMAPDDAA RARAAYNAGN AAFAEGDLQA ALHYYRTALL 
ADPDFEDARF NYEYVLRHLP PSSPPPPSVG GAEQNNPNDA DTQNTPGQGV ADGNRRHNAE 
RAPAQNDPSD SAASERQSQT PTSSAQLSPE AAARLLDALQ RQEQEALRRA LRLPTHPRTV 
KKDW