Gene Rmar_0406 details

Gene Information

• Locus tag: Rmar_0406
• ID: 8567040
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 449527
• End bp: 450291
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 68%
• Product: DNA repair protein RecO
• Protein accession: YP_003289698
• Protein GI: 268315979

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000965492
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGTCC GCACCGAAGC CATCGTCCTG CGCACGCTGC CCTACGGGGA GACGAGCCTG 
ATCGCCTCGC TCTTTACACG GGCGAAAGGC CGGCTTTCGA TGATGGCCAA AGGCGCGCGG 
TTGCCGGGCA GTCGGTTCGG GGGCACGCTG CAACCGCCCT CCTGTCTGCA GGTGGTCTTC 
TATTACCGAC CGACCCGCGA ACTTCAGACG CTCAGCGAAA GCAGTTTTGC GCAATATCTG 
CCCGAGCTGG GCCGCGACCT GGAAAAACTG ACGCTGAGCC TGCGCATGGT GGAGCTGGCC 
CATGCGCTGC TGCCGCCCGA GGAGCCCATG CCGGAGTTTT TCGAGACGTT CTGGCAGGTG 
CTGGCCCGGC TCGATGCGAC CCCGACCCGT GCCTGGAATC TGCTGCCGTG GTTTCAGCTC 
CGGCTGGCCG CCGCGCTGGG CTTTGCGCCC CGGATCGAAC GCGCGCTCGT CGAACAGATC 
GGTCCGGAAG GCGGCGAGCT GGCGCTGGCC AGCGGACAGG TGCGTCCGCG TTCGGCCGAC 
CCGGAACCGA CACAACCGGC CTCGCGGGCG GCGCTGCGGG CCTTCGCCTT TCTGGCACGT 
ACCGATCCCG ACACGGCCCT GCGGCTACAC CTGAACCCCT CCCATCGCCA CGAACTGCTC 
CAGCTCACCG AAGCCTACCT GCACCACCAC GTTCCCGAAG GCTTTCCCAC GCGCAGCGGA 
CGCGTGGCCG AGCGGCTGTT CGAGACGCTG CGGCCGGGAT CCTGA 

 

Protein sequence

MIVRTEAIVL RTLPYGETSL IASLFTRAKG RLSMMAKGAR LPGSRFGGTL QPPSCLQVVF 
YYRPTRELQT LSESSFAQYL PELGRDLEKL TLSLRMVELA HALLPPEEPM PEFFETFWQV 
LARLDATPTR AWNLLPWFQL RLAAALGFAP RIERALVEQI GPEGGELALA SGQVRPRSAD 
PEPTQPASRA ALRAFAFLAR TDPDTALRLH LNPSHRHELL QLTEAYLHHH VPEGFPTRSG 
RVAERLFETL RPGS