| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0362 |
|---|
| Symbol | |
|---|
| ID | 8566995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 402737 |
|---|
| End bp | 403768 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | glycosidase PH1107-related protein |
|---|
| Protein accession | YP_003289654 |
|---|
| Protein GI | 268315935 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACAGG ATTCCGAAGC CGTTACGTTG TTTCGACGCC ATCCGGAACC CATCCTGACG
CCGATGCCGG AGCTTTCGTG GGCGTCGGGG GCTGTGTTCA ATCCGGGAGC CTGGTACGAC
GGTACGCGCG TGCACCTGCT GGTGCGCGGC GTGCCGGCAG GCTACCGGCG CATCCGACTG
ACCGATACGC GTCCGGGCGA GCCGGAATGG GGCTTTGAAC CGTACGTGTC GTACATCGGC
TATGCCGAAA GCACCGACGG CGTGCACTTT TCCGTCCGGC CCGAACCGTT GATCCGGCCC
GACGCGCCCT ACGATCACTT CGGCGTCGAA GACCCCCGCA TCAGCCGCAT CGACGACCTG
TACCTGATCA CCTACACGGC ACTGGGGGCG CCCGCTTTTG CCCGACCGGG TTGCGTGCGC
ATCGGGCTGG CTTCAACCCG GGATTTTCAG TCGGTCACAA AGCACGGCAT CGTGGGACCG
GACACGACGG ACAAGGACGC CGTCATCTTT CCCCGGCGCA TTCGCGGGCG CATCGCCATG
CTGCACCGCA TCGTGCCGTC CATCCAGCTC ATCTACTTCG ACGACCTGGA GCAGCTTTTC
CATCCACCGA AGGCGCTGTG GGAACGACAC CTGGCCAGGC TGGACGAGCA CGTCGTGCTC
CGGCCCGAAT TCCCCTGGGA GGCCAAAAAG ATCGGGGCCG GTCCCACGCC GATCGAGACC
CCGGAGGGCT GGCTGCTCAT CTACCACGGC GTGGACGCGC AGCACGTGTA CCGCATGGGC
ATGGCGCTGC TGGATCTGGA CGATCCGCGT CGGGTGATCG CCCGCACGCC GGAGCCCGTG
CTGGAGCCCG AGCTTCCGTT CGAGTGCGAA GGCGATGTGC CGAACGTGGT CTTCCCGGAA
GGGGCCGTGG TGATCGGTGA CGAGCTGCTG GTCTACTACG GGGCGGCCGA TCGGACGATC
GGCCTGGCGC GGGCACCCCT TTCCGATGTG CTTGCCCACC TTCGCGCCTG CTCGGTTCGT
GTGTCTTCCT GA
|
|---|
| Protein sequence | MPQDSEAVTL FRRHPEPILT PMPELSWASG AVFNPGAWYD GTRVHLLVRG VPAGYRRIRL
TDTRPGEPEW GFEPYVSYIG YAESTDGVHF SVRPEPLIRP DAPYDHFGVE DPRISRIDDL
YLITYTALGA PAFARPGCVR IGLASTRDFQ SVTKHGIVGP DTTDKDAVIF PRRIRGRIAM
LHRIVPSIQL IYFDDLEQLF HPPKALWERH LARLDEHVVL RPEFPWEAKK IGAGPTPIET
PEGWLLIYHG VDAQHVYRMG MALLDLDDPR RVIARTPEPV LEPELPFECE GDVPNVVFPE
GAVVIGDELL VYYGAADRTI GLARAPLSDV LAHLRACSVR VSS
|
|---|
| |