Gene Rmar_0324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0324 
Symbol 
ID8566955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp351297 
End bp353012 
Gene Length1716 bp 
Protein Length571 aa 
Translation table11 
GC content67% 
IMG OID 
Productdihydroxy-acid dehydratase 
Protein accessionYP_003289617 
Protein GI268315898 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCCGC TCAACCGCTA CAGCCGTCGC ATCACCCAGC CGAAATCTCA GGGGGCGTCG 
CAGGCCATGC TGCTGGCCAC CGGCCTGAAG GAAGAAGACC TGGACAAGCC CCAGATCGGT
ATCGCCTCGG TCTGGTACGA AGGCAACCCC TGCAACATGC ACCTGCTGGA CCTGGCCGCC
GAGGTGAAGG CCGGCGTGCA GGAAGCCGGC ATGGTGGGCT TCCGGTTCAA CACGATCGGC
GTCTCCGACG GTATCTCGAT GGGCACCGAG GGCATGTCCT ACAGCCTGCC CTCGCGCGAT
CTGATCGCGG ACTCCATCGA GACGGTCATG GCCGCCCAGT GGTACGACGG CCTCATCGCG
CTGCCCGGTT GCGACAAGAA CATGCCGGGC TGCGTGATCG CCATGGGCCG GCTGAACCGC
CCCGCGCTGA TGATCTACGG CGGCACGATC CGCCCCGGCT GCCTCAACGG CCAGAAGCTG
GACGTGGTCA GCGCCTTCCA GAGCTACGGC GAGTACCTGG CGGGCAAAAT CACCGACGAA
CAGCGGCGGG CGATCATCCG CCACGCCTGT CCGGGACCGG GCGCCTGCGG CGGCATGTAC
ACGGCCAACA CGATGGCGGC GGCCATCGAG GCCATGGGCC TCTCGCTGCC CTTCAGCTCG
AGCCTCCCGG CCGAAGACCC GCGCAAACGC GAAGAGTGCC GCCGGGCTGG ACACGTCATG
CGCCGGCTTC TGGAGCAGGA CCTCAAACCC CGCGACATCG TCACGCGCGC CTCGCTCGAA
AACGCCATCG CCGTCGTCAT GGCGCTGGGC GGCTCGACGA ACGCCGTGCT GCACCTGCTG
GCCATCGCGC ACGCCTTCGA CCTGCCGCTG TCGCTCGACG ACTTTCAGCG CATCGCCCGG
CGCGTGCCGC TCCTGGCCGA CATGAAGCCC AGCGGCCGCT ACGTCATGGA AGACCTGTGT
CGCATCGGCG GCGTGCCGGC CGTCATGAAG CTGCTGCTCA AGCACGGCGT GCTGCACGGC
GACGCGCTCA CCGTGACGGG CAAAACGCTC GCCGAAAACC TTGCCGATGT GCCCGACCTG
CCCGAGAATC AGGACATCAT CCGCCCCTGG GACAACCCGA TCAAATCAAG CGCCCACATC
TACATCCTCT ACGGCAACCT GGCACCCGGC GGCTGCGTGG CCAAGATCAC GGGCAAAGAA
GGACTGCGTT TCAGCGGACC CGCCCGCGTT TTCGACTCCG AAGAAGACAT GCTGGCCGGA
CTCGAAGCGG GCCGCATTCA GCGCGGCGAC GTGATCGTCA TCCGCTATGA AGGACCGAAA
GGCGGTCCGG GCATGCCCGA AATGCTCACG CCCACCTCGG CGCTGATGGG GGCCGGATTG
GGCAAAGACG TGGCGCTGAT CACCGACGGC CGCTTCAGCG GCGGAAGCCA CGGCTTCATC
ATCGGCCACG TCGTACCCGA AGCCCAGGAG GGCGGCCCCA TCGCGCTCGT GCGCGACGGC
GACAGGATTA CGATCGACGC CGAAGCCGGC CTCATTCACG TGGACGTGTC CGACGAAGAG
CTGGCCCGTC GGCGTGCCGC CTGGACCCCG CCCCCGCTCA AGGTCACCCG CGGCGCCCTC
TTCCGCTACG TGCAGACCGT GCAGGACGCC TCGCGCGGCT GCATCACCGA CGCCCCGATC
GGCGAACCCC AACCCGTGGG ATCTCCCACT TCCTGA
 
Protein sequence
MPPLNRYSRR ITQPKSQGAS QAMLLATGLK EEDLDKPQIG IASVWYEGNP CNMHLLDLAA 
EVKAGVQEAG MVGFRFNTIG VSDGISMGTE GMSYSLPSRD LIADSIETVM AAQWYDGLIA
LPGCDKNMPG CVIAMGRLNR PALMIYGGTI RPGCLNGQKL DVVSAFQSYG EYLAGKITDE
QRRAIIRHAC PGPGACGGMY TANTMAAAIE AMGLSLPFSS SLPAEDPRKR EECRRAGHVM
RRLLEQDLKP RDIVTRASLE NAIAVVMALG GSTNAVLHLL AIAHAFDLPL SLDDFQRIAR
RVPLLADMKP SGRYVMEDLC RIGGVPAVMK LLLKHGVLHG DALTVTGKTL AENLADVPDL
PENQDIIRPW DNPIKSSAHI YILYGNLAPG GCVAKITGKE GLRFSGPARV FDSEEDMLAG
LEAGRIQRGD VIVIRYEGPK GGPGMPEMLT PTSALMGAGL GKDVALITDG RFSGGSHGFI
IGHVVPEAQE GGPIALVRDG DRITIDAEAG LIHVDVSDEE LARRRAAWTP PPLKVTRGAL
FRYVQTVQDA SRGCITDAPI GEPQPVGSPT S