Gene Rmar_0295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0295 
Symbol 
ID8566925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp322221 
End bp323858 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content69% 
IMG OID 
ProductLaminin G sub domain 2 
Protein accessionYP_003289588 
Protein GI268315869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.252604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACGC GGGCGCGTGT GCTGTTGCTG GCCGCGGTGC TGGCCTCGTG TCTGCGGGCG 
GGCACGGCCC GGGCGCAATT GCAGGCGCTC TGGAGCGGCG AGCGGCTGCA GGCCGGCCAG
GCGGCCAACC TGTTTGCCCG CTGGGAAGGT GAAGTGCCCT TCTACGGAAC CCTGCTGGAC
GTGCCGCCTG ACTGGTCCGT GCGCCGGGCA TGGGTTGTGC GGCCGGGCCG CGGACCGATG
CCCCTTCGGC TCGACACGCT AACAAGCGGT CGCTTCCGGC TGCGGCCGGA TCGGCCGATC
GACGGTCCAC TGGTGCTCTG CATCGAGACG ACGCCGGGCG GTCCCGGCCT GGCGCTCTGG
CAACTGGCAT CGCTTGAGCC CTCCGAGTCT TCCGCAAAAA AGCTCGAACC CCGGACGGCC
GAAGTGCAGC GACAGGCGCT TTTCGTGCAA CCGGCCGATA CGGAAAACCC GCGCAACTAC
GTGCTGGCGG TGCGGCGCGG CGCCCGGCCG CTCCTGGTGA CGGACACGCT GCTGCGCCGA
CTGGACCTGC GGCATCCGTT CACCGTGGCC CTCTGGCTCA AAAGCACCGA CCGCGACGCC
GTGGTGCTCT CCACCTGGCG CGGCGACGAA CAGCAGCCCT ATCCGATAGA GCTCGTGCTG
GACGCGGCCG GCTTTCTGCG GGCCTACCGG GGCCGTCCCG GCCGGCACCA GGCGCTGATC
ACGCCACGGC CCGTCGCCGA CGGAAGCTGG CATCACGTTG CGCTGAGCTA CGATCCGGCC
TCGGGCTGGA CCCGCCTCTA CCTGGACGGT CGCCCGGCCG ATTCGCTCTA CGTGCCGGAC
GTCACGTCTA TCGATCCGCC GGAAGCGCTC GCCCTCGGCG GTCGCCCGGG CCAGATGGAA
ACCGACTTCG GGGGCCTGCT GGACGCGATC GTGCTGGATC GACATGCCTG GTCGGCCGCT
CAGGTGCGCC GCCTCTTCCG AAGGGCCGAT CCGCCCGCCG ACGGCCTGCG TCTCGACTTC
GAGGCGGCTA CGCTTCGCCT GCCGCCGGGC ATGCGTCGTC GCCGCGCCGA TCTATTTTTC
TTTGAGCCCC TGCAACACCT GCAGGCGCTG AGCACCGACG ACGGCCAGGT GCTGCTGAGC
TGGACGTGCA CGGACCGCCA GACCCGTGCC TTTGTGGTGG AGCGCTCCAC CGACGGTCGC
GACTTTGCCA TGATTGCCCG CGTGCCGGCC GACTGCTCGG GCCTGCCCTT TACGTTCCGC
GACCCGTCGC CGCCTGACGC CCCGGTGCTC TACTATCGGA TTCAGCAGGA ACTTGAAGGC
GGCGTGCTTT ACCCTTCCGC CGTGCTCAAG CTGGGAAGGG CGCCTGTGCA ATCCGGCCGC
GCGTTGCTGG TGGGCAACTT TCCGAATCCA TTTCAGGGAC GCACCACCAT TCAGTACGAG
CTGCACGAGC CGATGCCCGT CCGGCTGTCG ATCTGGGACC TTTCGGGCCA CGAAGTGCGC
GTGCTGATCG ACGCCGTGCA GTCCCCCGGA CGGTACACGC TCACCTTCGA CGCTGCAGAT
TTGCCCAGCG GTACGTATTT TCTCCGCCTG GAGACGCCCG AGGGCGTGCA GACGCACAAG
ATGATCCTGG TCCGCTGA
 
Protein sequence
MKTRARVLLL AAVLASCLRA GTARAQLQAL WSGERLQAGQ AANLFARWEG EVPFYGTLLD 
VPPDWSVRRA WVVRPGRGPM PLRLDTLTSG RFRLRPDRPI DGPLVLCIET TPGGPGLALW
QLASLEPSES SAKKLEPRTA EVQRQALFVQ PADTENPRNY VLAVRRGARP LLVTDTLLRR
LDLRHPFTVA LWLKSTDRDA VVLSTWRGDE QQPYPIELVL DAAGFLRAYR GRPGRHQALI
TPRPVADGSW HHVALSYDPA SGWTRLYLDG RPADSLYVPD VTSIDPPEAL ALGGRPGQME
TDFGGLLDAI VLDRHAWSAA QVRRLFRRAD PPADGLRLDF EAATLRLPPG MRRRRADLFF
FEPLQHLQAL STDDGQVLLS WTCTDRQTRA FVVERSTDGR DFAMIARVPA DCSGLPFTFR
DPSPPDAPVL YYRIQQELEG GVLYPSAVLK LGRAPVQSGR ALLVGNFPNP FQGRTTIQYE
LHEPMPVRLS IWDLSGHEVR VLIDAVQSPG RYTLTFDAAD LPSGTYFLRL ETPEGVQTHK
MILVR