Gene Rmar_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0288 
Symbol 
ID8566918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp315340 
End bp317058 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content68% 
IMG OID 
Productprotein serine phosphatase with GAF(s) sensor(s) 
Protein accessionYP_003289582 
Protein GI268315863 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACG CCCCTACCGT CAGACCGACC GACCGCTTCG ACCTGCGGGC GCTCTACGAA 
GCGAGCCGCC TGCTGAGCAC TTCGGACGAC CGGGCGGCCG TCGTGCGCAA CCTGCTGCTC
TCGACGCTGA GCAAGCTGCT GGTCACACGC GGTGCCGTGC TGCTGTTCGA CCCGCTGATG
CAACGCTTCC GGGTGGCCGA CGCCCGGGGA CCGATCGACC TGGCGCCGGG CACCGAGCTG
GCGCTGCCGC TACCGGATAC GGACCGCCTG CTGCACGACG CGGAGGTGCC CGAAGCGCTC
CGCGCCCGGG GACTCTGCCT GCTGGTGCCC CTGATGTTTC GCCATCGGCT GCTGGGTCTG
CTGGTGCTGG GCCGTAAGGC CACGGGCCAG CCTTTTTCGA AACGCGAACT GGAGTTCGTG
CAGGCGCTGG CCACGCTGTC GGCCGCCGCG CTGCACAATG CGCTGCTTAT CGAGGAACTA
CAACAGGCCA ACCGGGACCT GGATCTGCGC CTGCAGCAAC TCGACACGCT GTTCGAGCTG
GCACAGGAAT TCAATGCGAC GATCGATCGA AACCGGCTGG CGCATCTGCT CTCGCTGGCG
CTGATGGGCC AGCTCCTCAT CAATCGCTAT CTGTTGCTGG TCCGCATTGA GGCCGCCGAC
GGAAACGCCA CGTTCGAGGT GCTTGCCAGC CGCGGACTGC CCTCCACGCT GCCGCCAGAA
CGGATCGAAC AACTGGGCCG CCTCGAACAG CCGCTGTTGC TGGAAGAAGC GCCCCCTGCC
TGGGACTGGC TGCGGGCCTT TCAACTCTAC CTGGTGCTGC CCATCCGGCA ACAGGGGGTC
ACCCAGGCCG TGCTGGGCCT GGGCCGACGC ATCAACGGCG CGCCCTACGG TCCGGGCGAA
CTGGAGTTTC TCTACGCGCT GGGCACGCTG GCCGCCTCGG CCATCCGCAA CACGTTTCTG
ATCGAAGCCC AGATCGAACG CCAGCACCTG GAGCGTGAGC TGCAGCAGGC CCGCCAGATC
CAGCAGCGCC TGCTGCCCCG GCGCCTGCCC GAAGTGCCGG GCGTGGAGCT GGCCGCCTGT
GCCCTGCCCA GCCAGGAGGT GGGCGGCGAT TATTATGATG TACTGCGCGA ACCCGACGGG
AGTCTGCGCC TGGCCATCGC CGACGTGGCC GGCAAAGGCA TGGCCGCCGC CCTGCTCATG
GCCAACCTGC AGGCCTGCCT GCACGTGCTC GTGCCGCTCG AAAGCACGCT GGAACGGAGC
ACGTCTCAGA TCAACCGCGT CGTCTGCGAA AACACCGAGG CCGACCGCTT CATCACGTTT
TTCCAGGCAC GCTACACCCC CTCCACCCGT CAGCTTGCCT ACGTGAACGC CGGCCACAAT
CCGCCGATGC TGCTCCGCGC GTCCGGCCGG GCGGAGCGGC TGAGCCGCGG CGGCCTGCTG
CTGGGCGTGC TTCCCGACGC CCGCTACGAA GCCGAACGCC TCTCCCTTGC GCCGGGCGAC
CTGCTCGTGC TGTTCACCGA CGGCGTCACC GAAGCGATGG GACCCGGCGA CGAACCCTTC
GGCGAAGACC GCCTGCTGGC CTGCCTGCAG GCCCACCGCC ACGCCTCGGC CCGGGCCATC
GTCGAGGCCG TACGCCAGGC CGTCGAGCAG TTCACCGGTC GCCCGGCCAA CAGCGACGAC
GACTTCACCC TGGTCGTTCT GAAAGTGCTA CCTTCCTGA
 
Protein sequence
MSDAPTVRPT DRFDLRALYE ASRLLSTSDD RAAVVRNLLL STLSKLLVTR GAVLLFDPLM 
QRFRVADARG PIDLAPGTEL ALPLPDTDRL LHDAEVPEAL RARGLCLLVP LMFRHRLLGL
LVLGRKATGQ PFSKRELEFV QALATLSAAA LHNALLIEEL QQANRDLDLR LQQLDTLFEL
AQEFNATIDR NRLAHLLSLA LMGQLLINRY LLLVRIEAAD GNATFEVLAS RGLPSTLPPE
RIEQLGRLEQ PLLLEEAPPA WDWLRAFQLY LVLPIRQQGV TQAVLGLGRR INGAPYGPGE
LEFLYALGTL AASAIRNTFL IEAQIERQHL ERELQQARQI QQRLLPRRLP EVPGVELAAC
ALPSQEVGGD YYDVLREPDG SLRLAIADVA GKGMAAALLM ANLQACLHVL VPLESTLERS
TSQINRVVCE NTEADRFITF FQARYTPSTR QLAYVNAGHN PPMLLRASGR AERLSRGGLL
LGVLPDARYE AERLSLAPGD LLVLFTDGVT EAMGPGDEPF GEDRLLACLQ AHRHASARAI
VEAVRQAVEQ FTGRPANSDD DFTLVVLKVL PS