| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0271 |
|---|
| Symbol | |
|---|
| ID | 8566901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 284346 |
|---|
| End bp | 286883 |
|---|
| Gene Length | 2538 bp |
|---|
| Protein Length | 845 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003289565 |
|---|
| Protein GI | 268315846 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGCC GCCTCCTGCT CGCGACGCTG TCGCTGCTCT GGGTTCACCT GTCGGTTGCG
CAACTGCCGG ACATCGACAC GTTCACCCGC GATATGGTCC GCCGGGACGG CCTGATTCCG
GTGTACCTCG ACACGCTGAA AGGCAAGCTC TACCTGGAAG TCATCCCCTC GGGCGCAGAC
CTGTTGCTGG TGCCGGCGCT CCCGGCCGGA CTGGGCTCCA ACGATGTGGG GCTCGACCGG
GGATTGTTCG GCGAGGAACG CGTCGTGCAG TTCCGACGGA CCGGCAACCA GATCCTGCTC
TATGCGCCCA ATCTGACCTA CCGGGCACTC GAAGGCGATG CGCCGGCCCG ACGGGCCGTC
GAAGAAGCCT TTGCAGCCTC CGTGCTGTGG CGCTTTCCGA TCGTGGCCCG CCAGGGCGAT
CGGTTTCTGA TCGATGCCAC CGACTTTGCC CTGCACGACG CCATGGACGT GGTCGGCCGT
CTGCGCCAGA CCGATCAGGG TACGTTTCGG CTGGACCGCG ACCGGAGCAC GATCCTTTTC
GAGGCGGTCA AGGCCTTTCC CCGCAACACG GTCATCGAAG CGCTGCTCAC GTTTTCGAGC
GAGCAGCCGG GTCGCTTCGT GCGTCAGGTA GCGGCCGTGC CCGAGCACGT CACGCTGCGC
CAGCGCCTGA TGTTTGTGGC CCTGCCGCCA CCGGGCTATC GGCCCCGGGC GCACGATCCG
CGGAGTGGCC TGTTTTCCAT CACGTTCTAC GATTACACGA GTCCGGTAGG CGAGCCGCTG
GCCCGGCGGT GGATCGTCCG ACATCGACTC CAGAAAAAAG ACCCGAACGC GCCGGTCAGC
GAGCCGGTAA AGCCCATCGT CTACTATGTG GACCCCGGCG CACCTGAGCC GATCCGTCAG
GCACTGATTG ATGGCGCTTC GTGGTGGGCC GAGGCGTTCG AGGCAGCCGG TTTCCGCAAC
GCCTTCCGCG TGGAGGTGCT GCCCGACACG GCCGATCCGC TCGACGTACG CTACAACGTG
ATCCAGTGGG TGCACCGGGC CACGCGCGGC TGGAGCTACG GCCGTACGAT CGTCGATCCG
CGCACGGGCG AGATCATCAA GGGCCACGTG ACGCTGGGCT CGCTGCGCAT CCGCCAGGAC
TACCTGATCT TCGAGGGCCT GCTGGCTCCC TACGACAGCG CGCATGCCCA CGGCTATCCG
CCTGAATCCG ACCCCATGCT GCAGCTGGCG CTGGCCCGCA TCCGGCAACT GGCCGCCCAC
GAAGTGGGCC ACACGCTGGG CCTGCAACAC AACTTCGCCG CCTCGGTGAA CGACCGCGCC
TCGGTCATGG ACTATCCGGC GCCCTACGTG CGCGTGCGCC CCGACGGCTT GCTGGATGTT
TCGGAAGCCT ATGATACGGG CATCGGCGCC TGGGACAAAG TGGCCATTCG CTACGCCTAC
AGCGAATTCC CGCCCGGCAC CGACGAGACG GCCGCGCTGG AAGCCATTCT GGAAGAGGCC
GCACGCCAGG GCCTGCATTT CATCACCGAC GCCGACGCGC GGCCGCCGGG CGGGGCCCAT
CCGCTGGCGC ACCTGTGGGA CAACGGCACC GACGCCGTCG CGGCCCTGCA CCGCGAGCTG
CAGGTACGCA AGGTGGCGTT GGAGCGCTTT GGCCTCCGGA ACCTGCGGGC AGGACGTCCG
CTGGCCACGC TCGAAGAAGT GCTGGTGCCC ATCTACCTCT GGCACCGGTA TCAGACCGAG
GCCACGGTCA AGCTGCTCGG CGGCGCGTTC TACACGTACG CGGTGCGCAC GCCGGATATG
CCCGAAGCGC CGGTGGTGCG CCCGGTTCCG GGTGCCACGC AACGGGCGGC GCTCGAAGCC
CTGCTCACGA TCGTGCAGCC CGCCACGCTG CGCCTTCCCG AAACCCTGCG CGGGCTCATT
CCGCCGCGCC CGCCGGGCTA TCCGGCGCAC CGCGAGCTGT TTGCCCGCCA GACGGCTCCG
CTGTTCGATC CGGTCGCGCC AGCCAAGGCG GCCGCCCGAC AGGTGTTCGA CCTGCTGCTC
CAACCGGAAC GGCTGAGCCG CCTGCACGAT CAGGCCCTGC AGGATCCGTC GCTTCCCTCG
CTAAGCGAGG TGCTGGAGCA GGTCAGCCGA AACGTCTGGG CTGCGCCCGT GCCCGACGAT
CCCTACGACG CTCACCTGCA GCGCGTGGTG CAGACGGCCT GGACGGCCGG CCTGCTGGAA
CGGGCGCGGG ACGCCCGCAC GCCCGTGGAC GTGCGCGTCG AGCTGGAAGC CCACCTGCGC
CGGTTGGCCG ACTGGCTCAC GCAAAACCCG GGCACCGACG CGGCCACCCG GGCCCACCGC
CGTTTCCATC GCGACTGGAT CCGGCGCTTC CTAGAGCGTC CCTACACGCC CGACGAGCCG
GGGGCCCCGG AACTGGCGCT GCCCCCCGGC GCGCCGATCG GTCTGCTGGA ACAGGTACTG
GAAAGGCCCC GCCGGCTGCT GGAAGCCACC TACGATCCCG GCTGTGCGCT CATTGACCAG
AAGTCATCCG AAAAATAA
|
|---|
| Protein sequence | MLRRLLLATL SLLWVHLSVA QLPDIDTFTR DMVRRDGLIP VYLDTLKGKL YLEVIPSGAD
LLLVPALPAG LGSNDVGLDR GLFGEERVVQ FRRTGNQILL YAPNLTYRAL EGDAPARRAV
EEAFAASVLW RFPIVARQGD RFLIDATDFA LHDAMDVVGR LRQTDQGTFR LDRDRSTILF
EAVKAFPRNT VIEALLTFSS EQPGRFVRQV AAVPEHVTLR QRLMFVALPP PGYRPRAHDP
RSGLFSITFY DYTSPVGEPL ARRWIVRHRL QKKDPNAPVS EPVKPIVYYV DPGAPEPIRQ
ALIDGASWWA EAFEAAGFRN AFRVEVLPDT ADPLDVRYNV IQWVHRATRG WSYGRTIVDP
RTGEIIKGHV TLGSLRIRQD YLIFEGLLAP YDSAHAHGYP PESDPMLQLA LARIRQLAAH
EVGHTLGLQH NFAASVNDRA SVMDYPAPYV RVRPDGLLDV SEAYDTGIGA WDKVAIRYAY
SEFPPGTDET AALEAILEEA ARQGLHFITD ADARPPGGAH PLAHLWDNGT DAVAALHREL
QVRKVALERF GLRNLRAGRP LATLEEVLVP IYLWHRYQTE ATVKLLGGAF YTYAVRTPDM
PEAPVVRPVP GATQRAALEA LLTIVQPATL RLPETLRGLI PPRPPGYPAH RELFARQTAP
LFDPVAPAKA AARQVFDLLL QPERLSRLHD QALQDPSLPS LSEVLEQVSR NVWAAPVPDD
PYDAHLQRVV QTAWTAGLLE RARDARTPVD VRVELEAHLR RLADWLTQNP GTDAATRAHR
RFHRDWIRRF LERPYTPDEP GAPELALPPG APIGLLEQVL ERPRRLLEAT YDPGCALIDQ
KSSEK
|
|---|
| |