Gene Rmar_0202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0202 
Symbol 
ID8566832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp215480 
End bp217096 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content67% 
IMG OID 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_003289496 
Protein GI268315777 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGCGG GACGCCTGCG CCAGCTCGCC TCCGAAACGG CCATCTACGG GCTGTCGTCC 
ATCCTGGCCC GGCTGCTCAA CTTTCTTCTT TTTCCGTTCT ACTCGCACGT CTTTGCCCCC
AACGCCTACG GGGTCATCTC CATCGTCTAT ACGGCCTTTC TGTTTTTCAA CATCGTCTAC
CAGTACGGCA TGGAATCGGC CTACCTGCGC TTTGCCGTGG AGGCCGACGA AGACGGACGA
CGCCGCGTCT TCAGCACGGC CGTCGGTTCG CTGCTGGGCA CCTCGCTGGT GCTCTCTGCG
CTGATCGTAC TGTTCCCTGC GCCCGTGGCC GCCCTGATCG ATCTGGAGGC CCGCTACCGA
TGGCTGCTCT ACTACATGGC CGTCATTCTG GTGCTCGACA CGCTGGCCGT CGTGCCGTTT
GCCGAGCTGC GGCTGCGCAA CCGCGCCTGG CGCTTTGCGC TGATCCGGCT GGCCGGCGTG
GCGGTCAACA TCGGCCTGAA CGTGCTGCTG CTGGTGGGCC TGCACCTGGG CGTGGCGGGC
GTCTTCATGG CGAACGCCGC GGCGTCGGCC ACCACCCTGC TGCTGCTGAC GCCGGAGTTC
CTGCGGCTCT GGCGTCCGAT GTTCGATGCC GGGCTCTGGC GTCGACTGCT GCGCTTCGGG
TTGCCCTTTC TGCCCGGCGG GCTGGGCTAT GCCATCACGG ATCGCATCAA CCTGCTGTTT
CTGAAGCGCA TGACGCCGGA GCAGGTGCGC CGGCTCTATG CCGATCGGTT CGATCTGGAG
GCGCTCGCCC GCGAGGCCGA ACGGGCGGCC CGCGCCGTGC TGGAACGCGC CGGTGGCGCG
TTGACGCCCG AGGTGCAGCA GCGCATGGCC GAGGCCGCTC AGGCCGTCTA CGGCAACCAC
GTGGTGGGCG TCTACAACGG CGTGCTCAAG CTGGCCATCT TCCTGATGCT GGTAGTGCAG
ATGTTCCGGT TTGCCTGGCA ACCGTTCTTC CTGCAGCACG CCCGCGATCC GGACGCCCCG
CAGCTCTTCG CCCGCGTCTT CTCGCTGCTG ACGGCCGTCA GTCTGCTGGT GCTGCTGAGC
GTCTCGTTTT TTGCCGCGGA GATCGTCCGT CTGCCGCTGC CCGGCGGCTA CGCGCTGATC
AACCCGCGCT ACTGGACGGG GCTGTTCATC GTGCCGGTGG CGCTGCTGGG CTATGTATTT
CAGGGCTGGT ACTACGTGTT CTCGGTAGGC GCCTATCTCC GGCACCGCAC AGCGCTGTTC
ATTCCGGCCA CGCTGGCCGG GGCGGCCGTG GCGCTGCTGT TCAACGCGCT GCTGGTGCCC
CGGCTGGGCA TGCTGGGGGC CGCCTGGGCC ACCACGCTGG CCTATGTCAC CATGGCACTT
GTGCTCTGGA GGCTGACCCG CCCGCACTAC GCGGTACCCT ACCGATGGGG TCAGGTGCTG
GCGCTGGGCG CCTGGAGCGC GCTCCTCTTC GGCGCCTGGC ATACATGGCC GGCGCTGCAG
CGGCCTCTTT TCGAGCTGCT CCTGCTCGTC GGATGGGCGG CCGCCCTGCC CGTGCTCCGG
GTGGTCACAC CTGCAGAATT GCGCACGCTA CTCCAACGCC GCTCGCCCTC AGCGTAG
 
Protein sequence
MPAGRLRQLA SETAIYGLSS ILARLLNFLL FPFYSHVFAP NAYGVISIVY TAFLFFNIVY 
QYGMESAYLR FAVEADEDGR RRVFSTAVGS LLGTSLVLSA LIVLFPAPVA ALIDLEARYR
WLLYYMAVIL VLDTLAVVPF AELRLRNRAW RFALIRLAGV AVNIGLNVLL LVGLHLGVAG
VFMANAAASA TTLLLLTPEF LRLWRPMFDA GLWRRLLRFG LPFLPGGLGY AITDRINLLF
LKRMTPEQVR RLYADRFDLE ALAREAERAA RAVLERAGGA LTPEVQQRMA EAAQAVYGNH
VVGVYNGVLK LAIFLMLVVQ MFRFAWQPFF LQHARDPDAP QLFARVFSLL TAVSLLVLLS
VSFFAAEIVR LPLPGGYALI NPRYWTGLFI VPVALLGYVF QGWYYVFSVG AYLRHRTALF
IPATLAGAAV ALLFNALLVP RLGMLGAAWA TTLAYVTMAL VLWRLTRPHY AVPYRWGQVL
ALGAWSALLF GAWHTWPALQ RPLFELLLLV GWAAALPVLR VVTPAELRTL LQRRSPSA