Gene Rmar_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0157 
Symbol 
ID8566782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp170740 
End bp172137 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content64% 
IMG OID 
ProductTPR repeat-containing protein 
Protein accessionYP_003289453 
Protein GI268315734 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTCT TTGAATTCGG CTTCGATGAC GCCGACGACG CGCTGGACCC CAGCCACATC 
GAACAGCTGG TGGCGGCCTA CGAAGCGCAG GGTTCGTCGG CGTATTTCGA TTCGGATACA
CTGGAAGAGA TTGCCACCTA CTACTACGAG CGCGGGCGTT TCGAGGACGC ACTGGGCGTG
ATCGATCGTC TGCTGGCGCT GCATCCCACG GCCTCGGATG CCTGGATGCG CCGGGGTATT
CTACTCAGCC ATCTGGGACG ACACGAAGAA GCGCTGCAGG CCTACGAGCG GGCGCTTTCG
CTCAATCCCA CCGACACGGA AACGCTCGTC AACCTGGGCA TCACGCTGGA CAATCTGGGG
CGCTTCGAGG AGGCGCTGCA GGCCTACGAA CGGGCCTTGC AGATCGATCC GCTGAACGAC
GAGATCTACT ACAATCTGGG CATCACGCTG GAGCGCATGG ATCGCCTGGA GGAGGCGGTT
CAGGCGCTGG AAGAAGCCGC CCGGCTCAAT CCTGATCATC CTGAGGTCTG GTACGAACTG
GGCTTCTGCT ACGATCGGTT GGGCGACGAC GAGCGCAGCC TGGCCTGCTA CGATCGGCAT
CTGGAACTGG ACCCCTACTC GGCCGATGCC TGGTACAACC GGGGCATCGT GCTCAACCGC
ATGGGTCGCT ACCGGGAGGC CGTCGAGTCG TACGACTATG CCATTGCCAT TCAGGAGGAC
TTTGGCTCGG CCTGGTACAA CCGGGGCAAT GCGCTGACCA ACCTGGGAGA TCTCCGGGGC
GCCATCGAAA GCTACGAGAA AGTGCTGGAA ATCGAGGGCG GCGACCCGGC CACCTACTAC
AACATCGCGC TGGCCTACGA AGAGCTGCAG GAGTACGAGA CGGCCATTCA GTACTTCCAG
CTTGCCCTGG AAGAAGACCC GGCCTATGCG GAGGCCTGGT ACGGGCTGGG CTGCTGCTAT
GATGCACTGG AGCGCTTCGA AGAGGCCATC GCCTGCATGG AGCGGGCCGT CACGCTGCAG
CCGGAGACCA GCGAGTTCTG GTACGCCAAG GCCGACTGCG AGTACAACGC CCGGCGCCTG
CAGGATGCGC TCCAGTCCTA CCGCCGGGTG ATCGAGCTCG ATCCGCAGAA CCGCGACGCC
TGGCTCGACT ACGCCGAGAC GCTCCTCGAA GCCGGCTACG TCGAGGAGGC GCTGCAGGCC
TATCGTCAGG CGCTGACGCT CAACCCGGAC GCCCGCGCCT ACATCCGCCA GGCCCGGGCA
CTGCTGGCAC TGGGGCGCTC GGAAGAGGGC ATTCGCTCGC TGAAGATGGC GCTCCGGCTG
GATCCCTCGG CCAAGGACGA GCTGCCGGAG TTCTACCGGG ATGCTTCGAT CCGACGGCAG
CTCGGTCTGG ACGGCTAA
 
Protein sequence
MSFFEFGFDD ADDALDPSHI EQLVAAYEAQ GSSAYFDSDT LEEIATYYYE RGRFEDALGV 
IDRLLALHPT ASDAWMRRGI LLSHLGRHEE ALQAYERALS LNPTDTETLV NLGITLDNLG
RFEEALQAYE RALQIDPLND EIYYNLGITL ERMDRLEEAV QALEEAARLN PDHPEVWYEL
GFCYDRLGDD ERSLACYDRH LELDPYSADA WYNRGIVLNR MGRYREAVES YDYAIAIQED
FGSAWYNRGN ALTNLGDLRG AIESYEKVLE IEGGDPATYY NIALAYEELQ EYETAIQYFQ
LALEEDPAYA EAWYGLGCCY DALERFEEAI ACMERAVTLQ PETSEFWYAK ADCEYNARRL
QDALQSYRRV IELDPQNRDA WLDYAETLLE AGYVEEALQA YRQALTLNPD ARAYIRQARA
LLALGRSEEG IRSLKMALRL DPSAKDELPE FYRDASIRRQ LGLDG