Gene Rmar_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0109 
Symbol 
ID8566734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp121072 
End bp121902 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content64% 
IMG OID 
Productglycoside hydrolase family 16 
Protein accessionYP_003289406 
Protein GI268315687 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0321176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCGGC GTGTTGCTTT CATTCTGTGC AGTTTGTTGT TCGGGTGCTC GATTCTGGAC 
GGCGACCAGC CGATCCGCCT GCCCCACTGG GAGCTGGTCT GGTCCGACGA GTTCGATTAC
AACGGGCTTC CGGATCCGGC GAAGTGGGAT TACGATGTGG GCGGTCACGG CTGGGGTAAC
CAGGAGTTGC AGTACTACAC GCGGGCGCGG ATCGAAAACG CCCGTGTAGG TGGTGGGGTG
CTCATCATCG AGGCGCGACG GGAGTCCTAC GAAGGGCGCG AGTACACCTC GGCGCGGCTG
GTGACGCGCG GAAAGGCGTC GTGGACGTAC GGGCGCTTTG AGATCCGGGC GCGGCTTCCC
TCGGGACGGG GCACCTGGCC GGCCATCTGG ATGCTTCCGG ATCGCCAGAC CTACGGCAGC
GCCTACTGGC CCGACAATGG CGAGATCGAC ATCATGGAGC ACGTCGGCTT CAATCCCGAT
GTGGTGCACG GTACCGTTCA CACGAAGGCC TACAACCACC TGCTGGGTAC GCAGCGGGGC
GGTAGCATTC GGGTACCCAC CGCCCGCACG GACTTCCACG TGTACGCGAT CGAGTGGACG
CCCGAGGAGA TTCGCTGGTT TGTGGACGAT TCGCTCTACT ACCGCTTTCC GAACGAGCGC
CTGACCAACC CCGAGGCCGA CTGGCGCCAC TGGCCCTTCG ATCAGCCGTT CCACCTGATC
ATGAACATCG CCGTCGGCGG CACCTGGGGC GGTCAGCAGG GCGTCGATCC GGAGGCCTTC
CCGGCCCAGC TCGTGGTCGA CTACGTGCGC GTGTACCGAT GGGTGGAGTA G
 
Protein sequence
MMRRVAFILC SLLFGCSILD GDQPIRLPHW ELVWSDEFDY NGLPDPAKWD YDVGGHGWGN 
QELQYYTRAR IENARVGGGV LIIEARRESY EGREYTSARL VTRGKASWTY GRFEIRARLP
SGRGTWPAIW MLPDRQTYGS AYWPDNGEID IMEHVGFNPD VVHGTVHTKA YNHLLGTQRG
GSIRVPTART DFHVYAIEWT PEEIRWFVDD SLYYRFPNER LTNPEADWRH WPFDQPFHLI
MNIAVGGTWG GQQGVDPEAF PAQLVVDYVR VYRWVE