Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0109 |
Symbol | |
ID | 8566734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 121072 |
End bp | 121902 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | glycoside hydrolase family 16 |
Protein accession | YP_003289406 |
Protein GI | 268315687 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0321176 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCGGC GTGTTGCTTT CATTCTGTGC AGTTTGTTGT TCGGGTGCTC GATTCTGGAC GGCGACCAGC CGATCCGCCT GCCCCACTGG GAGCTGGTCT GGTCCGACGA GTTCGATTAC AACGGGCTTC CGGATCCGGC GAAGTGGGAT TACGATGTGG GCGGTCACGG CTGGGGTAAC CAGGAGTTGC AGTACTACAC GCGGGCGCGG ATCGAAAACG CCCGTGTAGG TGGTGGGGTG CTCATCATCG AGGCGCGACG GGAGTCCTAC GAAGGGCGCG AGTACACCTC GGCGCGGCTG GTGACGCGCG GAAAGGCGTC GTGGACGTAC GGGCGCTTTG AGATCCGGGC GCGGCTTCCC TCGGGACGGG GCACCTGGCC GGCCATCTGG ATGCTTCCGG ATCGCCAGAC CTACGGCAGC GCCTACTGGC CCGACAATGG CGAGATCGAC ATCATGGAGC ACGTCGGCTT CAATCCCGAT GTGGTGCACG GTACCGTTCA CACGAAGGCC TACAACCACC TGCTGGGTAC GCAGCGGGGC GGTAGCATTC GGGTACCCAC CGCCCGCACG GACTTCCACG TGTACGCGAT CGAGTGGACG CCCGAGGAGA TTCGCTGGTT TGTGGACGAT TCGCTCTACT ACCGCTTTCC GAACGAGCGC CTGACCAACC CCGAGGCCGA CTGGCGCCAC TGGCCCTTCG ATCAGCCGTT CCACCTGATC ATGAACATCG CCGTCGGCGG CACCTGGGGC GGTCAGCAGG GCGTCGATCC GGAGGCCTTC CCGGCCCAGC TCGTGGTCGA CTACGTGCGC GTGTACCGAT GGGTGGAGTA G
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Protein sequence | MMRRVAFILC SLLFGCSILD GDQPIRLPHW ELVWSDEFDY NGLPDPAKWD YDVGGHGWGN QELQYYTRAR IENARVGGGV LIIEARRESY EGREYTSARL VTRGKASWTY GRFEIRARLP SGRGTWPAIW MLPDRQTYGS AYWPDNGEID IMEHVGFNPD VVHGTVHTKA YNHLLGTQRG GSIRVPTART DFHVYAIEWT PEEIRWFVDD SLYYRFPNER LTNPEADWRH WPFDQPFHLI MNIAVGGTWG GQQGVDPEAF PAQLVVDYVR VYRWVE
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