| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001599 |
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| Symbol | |
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| ID | 8559912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1813528 |
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| End bp | 1815441 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646409267 |
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| Product | GGDEF domain protein |
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| Protein accession | YP_003288745 |
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| Protein GI | 262396892 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.707658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACTTTC CGATTAAAAC GCTAACTTGC GCGCTGTTCT CAGTACTTGG ATTCTTCTTC
CATCCAACCC ATGTACTTGC CAACACAGAA AAACAGAGCT ACCTGGAAGA ACACATTTCT
CCTCAAAGCA GCTCCATGCT CAATCTCTAT TTTCGTTCAA TGGGTAAGCC GCGCTCAATT
GAAGAAGATG AATTAGTTGC GCCACAGAAT GCGTCAGCGG AATCTCTTGC GCTTTATTAC
TTTGCGCGCC TATACCTAAA GCGCTACGAA GGCGTTCCGC TGCCCAAAGA TATGCCTGAT
TTAATTGAGT TTGGGACAGA GCATAATTTA CCGTGGGTAG TCGCTGAAGC ACAGCTTAAT
AAAGCGGTAA CCATGATTGA ACTAGACGAC AATTGGAATG CAGAACTTGT ACTCCATGAC
ATCATCGCTG AAGCCCGCGA TCTCGGCTAT TTAGCGCTAG AAGGAAGAGC ATATCGCTGG
CTAGGGAACT TAGAGGTTTC ACGGAATCAA CTACGTAGCG GACTCAAGTA TTACCGAACC
GCCTATGAGT TGTTAGAGAG AACCGTATTT GAAATGCAAG TTGCCATGAC GCTGAATAAC
ATCGGTACCG TCTATATCGA TGCATCCGAT TGGGCTCGCG CCAGTAGCTA CCTTACGCAA
GCACTCGATA CCTATTTAAA CAGCGAATAT CAATATGACA ACAGCCTTTT CATTGGGGTT
ATCTACGCAA ACTTAAGTAT TGTTCACTTA AGCAGTGGAG ATAGCGAAAA GGCAGAATAC
TATTTTAATG AAGCAATCCG ACTCTCAATG CAAACGGGGT CAGACGTCAT CAAACACTAT
TCATTATCCA GCTTCTCACA AATGTTAAGT TCGATAGGGA AAATTGATGA AGCGTTGATG
GTTGCACAGC GTTGCGTAGC TCTCCCTATC ACGGGAAACG TAGAGGCGAA GAAAATGCCT
TGTTATGAAG CATATGCAGA AGCATACCTC GCAGATGAAC AATACGATAA AGCTATTTCG
ACAGCTATCA ACGTACTTGA GCAAACTAAA TCAACCGATG AGCTAGAAAT ACGACAGCGC
ATTGATATGC TGTCGGTCCT AGTAAACGCG AATCAAACCC TTAATAATTT TGAAGCGGCT
TTTCGTTACT TGACTCAGTT AAGAGAGCTA GAAGCTGAAT TTTCTCATCA TATTCACGGC
GAAGAGATGA TTAATATTAA GTTTGACCTC GAAGCTAAGT TAGCTCAGAA AGAACTCAAG
CTACTAGAAA CGAAAAATGC GTTGCAAGCT TCAGAGCTGC GTTCACAACG CTATAGAGAA
ATGTTTTACT TTATCGCTAT CGCAGCGATT GGTGTCGTTG GCTTTCGTTA CGTACTGCGC
GTTAGGAGTA TTAATAAAGC ACTCACTCAA GAAAATACTA CCGATCCATT AACTCAACTG
CACAACCGTC GCTACCTTCC CATTTGGCTG GATAAAATGG CTCGTAGAAG CCCAGATAGA
ACGTTTGCCT TAGCCGTATT AGATATCGAT CATTTTAAAA CGTTTAACGA TGAATATGGG
CATGATATTG GCGACAAGAT GTTAATGCAT ATTGCCAGGT TATTTAATGA ATCGACTCGC
TCTGGTGACC TACTCATCCG TTGGGGTGGA GAGGAGTTTG TCTTATTATT TGAAGTAAAC
AGAACTGAAG ATTGCGCTAA ATTCTTGGAT CGATTGAGAT ATATCGTGGA AAAAACGCCA
CTAGTGGTTG ACTCTAAGTC ATTAAACGCG ACAATTTCTC TCGGAGCTGT CGACAGACTG
TCCGTAAAAA CTATTCAACA AGAATGGGAT CAATGGTTTT TCTTCGCAGA TCAAGCTTTG
TATGACGCAA AGCAAGCAGG AAGAAATCGC TTCGTTATTC ACCCGACGTC ATAA
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| Protein sequence | MHFPIKTLTC ALFSVLGFFF HPTHVLANTE KQSYLEEHIS PQSSSMLNLY FRSMGKPRSI
EEDELVAPQN ASAESLALYY FARLYLKRYE GVPLPKDMPD LIEFGTEHNL PWVVAEAQLN
KAVTMIELDD NWNAELVLHD IIAEARDLGY LALEGRAYRW LGNLEVSRNQ LRSGLKYYRT
AYELLERTVF EMQVAMTLNN IGTVYIDASD WARASSYLTQ ALDTYLNSEY QYDNSLFIGV
IYANLSIVHL SSGDSEKAEY YFNEAIRLSM QTGSDVIKHY SLSSFSQMLS SIGKIDEALM
VAQRCVALPI TGNVEAKKMP CYEAYAEAYL ADEQYDKAIS TAINVLEQTK STDELEIRQR
IDMLSVLVNA NQTLNNFEAA FRYLTQLREL EAEFSHHIHG EEMINIKFDL EAKLAQKELK
LLETKNALQA SELRSQRYRE MFYFIAIAAI GVVGFRYVLR VRSINKALTQ ENTTDPLTQL
HNRRYLPIWL DKMARRSPDR TFALAVLDID HFKTFNDEYG HDIGDKMLMH IARLFNESTR
SGDLLIRWGG EEFVLLFEVN RTEDCAKFLD RLRYIVEKTP LVVDSKSLNA TISLGAVDRL
SVKTIQQEWD QWFFFADQAL YDAKQAGRNR FVIHPTS
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