Gene VEA_001539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001539 
Symbol 
ID8559852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1741488 
End bp1742366 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content47% 
IMG OID646409209 
Productpermease 
Protein accessionYP_003288687 
Protein GI262396834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAACT CAGAACGCAA AGCGACGGTT ATTCTGGTTG CGACAACGAT GATCGCGGCA 
CTTGGTTGGA TCTTTTCTAA GGAAACAATA CAGGGTTTAC CACCTTTCGG CTTTATCGGG
GCGCGATTTA CTATTGCATC GCTCTGTCTG CTGCCGTTGT GCTATCGACC TTTGCTCAAA
GCGAATTTGA AAGATGTGCT TTCTGCTGGT GGTGTCGGGC TCCTGTTAGG CAGTGCCGTT
ATGACATGGA TTTACGCCAT CTCCATCAGC GACACGCTCG GGGAAGGCGC ATTTATCATG
AGTCTCTCCA TGCTATTTGT GCCTATTGTT GCGTGGGTTA TGTTTCGTCA ACGACCACAA
CGAATTTTCT GGCTCTCTTT GCCTATCGCG GTATTAGGTC TCGCCTGTCT CTCTTTAGTT
GGCGGTTGGA AGCAATCGGC CAGTCAATTT TGGTTTCTTG GTGCAGCACT GGTTTTGGCG
CTTCATTTTA ATGTGAACAG CAAATACTCT CAAAAACTAC CTGTGTTGCT GCTTACTTGC
GTGCAGCTTT TTTCTGCTGG TTGTTTAGGT TTGTTGGTTT CTTTCTTTAT GGAGTCTTTT
CCGGCAGAGG TTGACTCCTC CATTTGGTGG TGGTTCGCGT TGAGCACTTT GCTAGCGACG
AGCTTGCGTT ACGTAATGCA AACCATGGGG CAAAAATTTG TTCAGGCAGG TAATGCTGCC
TTGATCATGA TATTAGAGCC AGTTTGGACC GTCATTCTAA GCGTGCTGTG GTATGGCGAA
GTGCTAACGG CAAATAAGCT AGTAGGCTGT GTGCTTATCT TATTTTCTCT AATTATTTAT
CGTACTGGCG GGCGGTTTCG CTTCCCTACC CGAAAGTAG
 
Protein sequence
MFNSERKATV ILVATTMIAA LGWIFSKETI QGLPPFGFIG ARFTIASLCL LPLCYRPLLK 
ANLKDVLSAG GVGLLLGSAV MTWIYAISIS DTLGEGAFIM SLSMLFVPIV AWVMFRQRPQ
RIFWLSLPIA VLGLACLSLV GGWKQSASQF WFLGAALVLA LHFNVNSKYS QKLPVLLLTC
VQLFSAGCLG LLVSFFMESF PAEVDSSIWW WFALSTLLAT SLRYVMQTMG QKFVQAGNAA
LIMILEPVWT VILSVLWYGE VLTANKLVGC VLILFSLIIY RTGGRFRFPT RK