| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001495 |
|---|
| Symbol | |
|---|
| ID | 8559807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 1686036 |
|---|
| End bp | 1686830 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646409164 |
|---|
| Product | transcriptional regulator AraC family protein |
|---|
| Protein accession | YP_003288643 |
|---|
| Protein GI | 262396790 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.12324 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACAAACT CTGATTACAG CGAATGGAAA AATGGAGCCG CACTGATCGC TAAGGAGTGG
CAGCATGAAA GGAGCGACTT CAACCATTTG GAGCAACGGC CACATAATTG GCACAGTCAT
CATCGAGGCC AGCTACTGTG TATAGATGAA GGGCTAATAC AGGTAAAAAC CGATGAAGGA
GCGTGGATAC TACCCCCTCA CCGAGCTGGT TGGATCCCCC CGGGTGCGAT GCACAGTGTT
TATTTTTGTG GTTCTCTGAA AGGTCGTTCA TTACTGTTTA CTCCAGAGAG TTGTGAGCGG
TTTCCAATGA GACCTTGTGT GATCCAAATG AGCGATGTCT TGAAAGCCCT ATCGGTTAGG
GCATCGATAT GGAGCAAAAC AGACGAGCTA TCCATACAGT CTTTACGTAT TCTTGCCGTA
ATATCCGATG AAATCGTCAA TAGCCCTCAT GAGTCACTCC ACATCCCACT GCCCAGAGAT
CCGAGACTGC AAAAAGTTAC TCAAGCAATT TTAATAGACC CAAACAGCAA ACATTCTGTG
GAGCATTGGG CAAAGATCGG GGCAGTCTCA TCTCGGACAT TAAGACGATT GATTCGAAGT
GAGTTAAACA TGAGTTTTAG TGAATGGCGG CAACAAGCAC TGCTAATACA TTCGTTAGAA
ATGATGGCAC GCGGAGAATC AGTAGGAGCG GTTGCACATG CTTTGGGTTA TTCGACACCC
AGTAACTTTA TCGCTATGTT TCGTCGGGTA TATGGCGATT CACCCACGCG TTACTTTTCG
AGTCGTGGCA TATAG
|
|---|
| Protein sequence | MTNSDYSEWK NGAALIAKEW QHERSDFNHL EQRPHNWHSH HRGQLLCIDE GLIQVKTDEG
AWILPPHRAG WIPPGAMHSV YFCGSLKGRS LLFTPESCER FPMRPCVIQM SDVLKALSVR
ASIWSKTDEL SIQSLRILAV ISDEIVNSPH ESLHIPLPRD PRLQKVTQAI LIDPNSKHSV
EHWAKIGAVS SRTLRRLIRS ELNMSFSEWR QQALLIHSLE MMARGESVGA VAHALGYSTP
SNFIAMFRRV YGDSPTRYFS SRGI
|
|---|
| |