Gene VEA_001468 details

Gene Information

• Locus tag: VEA_001468
• ID: 8559780
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013457
• Strand: +
• Start bp: 1655875
• End bp: 1657875
• Gene Length: 2001 bp
• Protein Length: 666 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 646409137
• Product: methyl-accepting chemotaxis protein
• Protein accession: YP_003288616
• Protein GI: 262396763
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCTTA CGATATCAGG GAAGTTGCAG CTCAGTTTTG TGCTGCTAGC CGTACTTTTT 
ATGGCATCAG CGGTATTCAC GTATCGCAAC GTCACCACCG TAGAGCAATA CGCCTCTTCG 
CTACTTAAAT CCGATTTACC GACCGTAGAC ACTAGTCGCG GTATCCAACA GTCCGTTCAA 
GCGTCGCTGT CCTCTATTCG AGCCTACATG TTGCTAGGTG GCGATGAAGA GGCGAGCGCA 
CGTCTAAGTG AGGACGTACG CAATATCATG GCATCTACAG ACGAGTCGCT TCCGACGTTG 
CAGGCTTTGA TCTCTGAACA GGATTTTCAA GAAATTCAAA GCCAGTGGGA TGCGGTAAAA 
GTCTCTCTAA ACAAGCTGAT TGAACTTAGC CACAGTGATG AGAACTTACC CGCGCACAAC 
CTCTTTATTA ACGAAGCGGC ACCCATTGCA GAAGTGGCAC TTGATCAGCT TCAAAGCTTA 
ATCAATGAAG AGTCAGGAAA CCCATTTGGT GGAGACAGAA AGCGTCTGTT TAAAGTCTAC 
GCCGACAGCT ATACCTCGCT AGCCAATGCT CTGTCCGCCT TGCGAGATTT CCTGTTGTAC 
GGGCAGCAAG ACCATCTAGA CAAATACCAC GATTTGATTA AGTACCACAA TCAGTCTGTG 
GCGGAAATCG ACAGCAAACT CGACAGACTG ACTGATAACG ACCAATCACT GTGGTCACTG 
TTTAAAGAAA TGCAGCAACT GTACTTTCCT TTAGCAGAGC AGGTGATTGC ATTACGTCAG 
TCACCAGAAT GGAACGAATC AAACTTGCTG ATGGCGAACG AACTGTTGCC TGCAGCAGAT 
GCACTAGACC AAAGCTTAGA GACGATCGTA TTGGCTCAAC AAAGTCGTGC TGATCAAAGC 
GGGCAGGGTA TCAATCAGTC GATCAAGAAC GTACTCACCA CCATGTTGAT CGCTGCGGCA 
TTGGTTTTGT TTGCCGCGAT AGCGATTTCA AAATACATGG GCAATACCAT TGGTCGCCGA 
GTGAAAAACT TATCGGAGCG AGCCAAGACG ATCGCTTCAG GGGACGTTTC TCAGCCTCCG 
CTCACTGTTG TTGGGAAAGA TGAATTGGCA GACCTTACCG ATTCGATTAA CCGCATGAAC 
CAATCGTTAG CGAGCATCGT GGCAGGGGTG AGTGAAAAAG CGCACCAAGT GGATACCAGT 
ATGGGGGCTT TGTTGGAATC GGCGCAAGTC ACCTCATCGA ATGTTGAACA GCAACAGACC 
AGCATTGTTG AAATGGGAAG CCAATTGGAT GAAATCGCTT TAGCCGCGCG TAACACTCTA 
GATCAAGCCA ACCAATCGGT GCAGAAACTT TCTGACTCAA AAGGCGAGAT TGAACAAGGT 
CGCGATGCTT TAGAGCAAAA CAAAGTCACC ATGGAAAGCT TGCATGGCAG CATTGAAACC 
GCGAGTGCGC AAGTGACGCA GTTAAGCAAA GAGAGCGAAG CCATTGGCCG AGTTACGGAA 
GTGATTGAAG GCTTGGCAGA GCAAACTAAC TTACTGGCAT TGAATGCGGC GATAGAAGCA 
GCGCGTGCAG GTGATCAAGG TAGAGGCTTT GCGGTTGTGG CGGACGAAGT ACGGATGTTA 
GCGACTCGCA CTACTCAATC GACGACAGAA ATCAACGGCA TCATCAATGC GATTCAACGT 
TCGACTAATT CAGTGGTTGA GGAAATTGAA CACAGCCAAT CACTTGCAGA GCAGGGCGCA 
GAGCACATTG AAAAAGCGGT CACTCGTTTG CTCGCTACTA CTGAGCAAAT CGGTTCTTTG 
AATGAGCAAA TGGCAGAACT TGCGGCAGCG GCAGAGCAGC AATCGCATGC GACCAATTCG 
ATCACTGGAT TGATGTCTGA TATTACACAA TCAGTGGACG AAGTTTCGAA TAACAGCCAA 
CGTGCATCAG AGACGTCATT GCAAGTAAAA GAACAAGTTA CCGAGCTGAA TCAACAGATG 
GCAACTTTCA AGACCGCATA A 

 

Protein sequence

MNLTISGKLQ LSFVLLAVLF MASAVFTYRN VTTVEQYASS LLKSDLPTVD TSRGIQQSVQ 
ASLSSIRAYM LLGGDEEASA RLSEDVRNIM ASTDESLPTL QALISEQDFQ EIQSQWDAVK 
VSLNKLIELS HSDENLPAHN LFINEAAPIA EVALDQLQSL INEESGNPFG GDRKRLFKVY 
ADSYTSLANA LSALRDFLLY GQQDHLDKYH DLIKYHNQSV AEIDSKLDRL TDNDQSLWSL 
FKEMQQLYFP LAEQVIALRQ SPEWNESNLL MANELLPAAD ALDQSLETIV LAQQSRADQS 
GQGINQSIKN VLTTMLIAAA LVLFAAIAIS KYMGNTIGRR VKNLSERAKT IASGDVSQPP 
LTVVGKDELA DLTDSINRMN QSLASIVAGV SEKAHQVDTS MGALLESAQV TSSNVEQQQT 
SIVEMGSQLD EIALAARNTL DQANQSVQKL SDSKGEIEQG RDALEQNKVT MESLHGSIET 
ASAQVTQLSK ESEAIGRVTE VIEGLAEQTN LLALNAAIEA ARAGDQGRGF AVVADEVRML 
ATRTTQSTTE INGIINAIQR STNSVVEEIE HSQSLAEQGA EHIEKAVTRL LATTEQIGSL 
NEQMAELAAA AEQQSHATNS ITGLMSDITQ SVDEVSNNSQ RASETSLQVK EQVTELNQQM 
ATFKTA