Gene VEA_001456 details

Gene Information

• Locus tag: VEA_001456
• ID: 8559768
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013457
• Strand: +
• Start bp: 1645456
• End bp: 1646130
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 646409125
• Product: protein F-related protein
• Protein accession: YP_003288604
• Protein GI: 262396751
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTTTGTC GACACAATGG ACAAGAGTTT TTCTACGTTG GTAATGGTAT GAAGCAGTGG 
TTTTTAATTG TTTGCGGCAT TCTGACTGGG TGCAGTAGCC TTGATCAAGA CATGGTTCCT 
GGCGGGAACA TTTTAGATAC AGCTCCTAAA ACAAACACCG AGCTGAGACA TCCTGAGTGG 
GGCTATCCGA GCGCCTCCAG TGTGGCTTCT TCACCTCGCA CGTATCAGAC TGAGAGGGCA 
TCAGTAAAAA AGTCGCAAAA TGTGACCTCT CTGGAAATGT TTCTGAACAG GCACAATATT 
CCTCATGAGA CACTCAGTGG CGGTCACTTA ATGATACGTT TGAAAGAGCA AGTGCATTTT 
CAAACTGGCT CTGCTCAGTT ATCAGCGCAA TCTCAAGACT GGATTCGAAA CATTGGTCAC 
TATCTAGCAG GAAGAACGGA TGTGGATGTC GTGATCGATG GCCATGCCGA TAGCACAGGA 
GCTGCCAGCT TTAATGACAC GTTGTCAGAA AAGCGAGCTC GTGAAGTGGA AAAGCAACTA 
CTGGCGACGA GTATTCCTCG TCAACGCGTG TTTTCTAGAG GTTTTGGCGA GTATGTGCCG 
CAGTGCAGTA ATTCGACAGC CAATGGCAAA GCTTGTAATC GACGCGTAGA GCTAACGCTG 
ATCGTTGATG AGTAA 

 

Protein sequence

MFCRHNGQEF FYVGNGMKQW FLIVCGILTG CSSLDQDMVP GGNILDTAPK TNTELRHPEW 
GYPSASSVAS SPRTYQTERA SVKKSQNVTS LEMFLNRHNI PHETLSGGHL MIRLKEQVHF 
QTGSAQLSAQ SQDWIRNIGH YLAGRTDVDV VIDGHADSTG AASFNDTLSE KRAREVEKQL 
LATSIPRQRV FSRGFGEYVP QCSNSTANGK ACNRRVELTL IVDE