| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001369 |
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| Symbol | |
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| ID | 8559681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1548405 |
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| End bp | 1549304 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646409038 |
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| Product | putative transcriptional regulator LysR family protein |
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| Protein accession | YP_003288517 |
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| Protein GI | 262396664 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.388836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGATA ACGTCGACCA AATCTGGTTA AAAAGTTTTC ACTGTGTCTA TGAAAACAAC
AGCTTTAAGC GAGCCGCTGA GTGTTTGAAT ATACCAACAT CGAATGTCAG CCGACATATT
GCCCTGCTTG AAGAAAAGTT AAACATCAGG TTGTTCAATA GAACGACAAG GCGAATGACG
CCTACCGAGG CTGGAGAAGA GCTCTATAGC AGCACTCGTC CATTATTGGA ACAACTCAAC
AACGCGCTAG AAACCGTGAC TCGCCACTCG CACACAGTAA CGGGAGAGCT ACGTATTCTT
ATGCCAGACA CACCTGTACT GGCCAAAGCG GTTGTCACCT TTTGCACGCA ATACCCGTCA
ATCTCTTTGT CTTGCGATAC AACGCTAAAC CCTAAAGATG AGGTTATTGA TAGCTTTGAT
GTCATTTTGA GTTTTCATAG AGGGACTTTG TCTGACAGCA ATTGGGTGGC AAGGGAAATC
AAACGCTGGC CCAGTGCTAT TTTGGCTGCG CCTCAACTGC TTAATAAGTA CGCCAGCCCT
TACAAAATTA CGGATTTAAA TCATGTTCCC TGTATCACGA CACTTACTGC AGTAAATGGC
GCTCCCTGGG TGTTTAAAAA TCCCGACGGA GGTCATATTA CGCAAACAGT ACAATCCTCG
TTCAAAGTAA ACAGTGGTCA TCTCGCTAAA TCTGGCGCGT TATCAGGGCT TGGATACGCA
ATACTTCCAA TAGAGTCATG CAAAGACGAG ATCGAGAGCG GCAAGCTTGA AGTCATCCCT
CTAGAGTACG AACCTGAAGA TTTAGTGCTT TATGCGTTTT ACTCTTCTAG AAAGCACTTA
GCCAAGAAAA TCTCTATGTT TGTTGAGCAC TTAAAACAAC ACGCGAAACT TAACGCCTAG
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| Protein sequence | MFDNVDQIWL KSFHCVYENN SFKRAAECLN IPTSNVSRHI ALLEEKLNIR LFNRTTRRMT
PTEAGEELYS STRPLLEQLN NALETVTRHS HTVTGELRIL MPDTPVLAKA VVTFCTQYPS
ISLSCDTTLN PKDEVIDSFD VILSFHRGTL SDSNWVAREI KRWPSAILAA PQLLNKYASP
YKITDLNHVP CITTLTAVNG APWVFKNPDG GHITQTVQSS FKVNSGHLAK SGALSGLGYA
ILPIESCKDE IESGKLEVIP LEYEPEDLVL YAFYSSRKHL AKKISMFVEH LKQHAKLNA
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