| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001317 |
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| Symbol | |
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| ID | 8559629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1500023 |
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| End bp | 1501330 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646408986 |
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| Product | capsular polysaccharide synthesis enzyme cpsJ Membrane protein export of O-antigen and teichoic acid |
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| Protein accession | YP_003288465 |
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| Protein GI | 262396612 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.872862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCACA CTGTTCAACA AAAATTACTG TTGATGCCCA GCGGTAAAAA AAGCTTGCTA
TCTACTGGAT TGAAAACCGC AATCACGCGT GTGTTGAGTG CGCTATTTGC TTTTTTACTG
ACACTGATTG TATCGAAGAC CAGTGACCCT TCGACGTCCG GTCAATTTTT CTTTTTATTC
AACCTAGTCT CACTACTCGC GATCGTTTCT CAGCTAGGTT TTGATGTCTC ATTAGTTCGC
TACAATGCGA TCGCCTTTAA TAACAAAGAG ACACTTCAAC AAAGCCACAA CTATAAAACG
GCACTTTATC GAAGTATGGC GTTTTGCTTG CTAGCCATTG CCGTTTTGTT GGTAGGATTT
AATCTGTTTC CTGAACAGCT AAACCAGACC CAATCGCCAA TGCATGCGAT TACTTTAGGC
TTGTTCTGCA TACCGTTTTT GGTGCTTGCA CAGACCAACA GTCGTGTGCT TCAAGCATGT
AGAAAGGTCG TGTCATCACT GTTTGCTTTA CAGCTTGGCG TGAGTATGTT GATGGTCTTT
TTTGTCTTTG GCTTGGACTA TATCGGTCAG CAAAATATCA ACAATCTGAT GACCGCACTG
CTTCTGGCGA GTATGAGCGT CGCGGTAATA TCCAGTGTTA ATTGGCTAGG TTCAGGTCAG
TATCAGACAT CGGCTTTCGT ACCAAACAAA AAAATGGTCG CTTCTGCCAA GCAAGTCTGG
ATTGGCAGTA TCTTCACGAA CGTTCTTCAA TGGGGAAGCC TTGTCATTGC GGGCTTTTTT
ATCTCAACAG CGGAACTCGG TCTATTAGCT GCAGCTCAAC GTACATCACT ACTGATTGGC
TTTGTGCTGA TTACCATTAA CTTTATGGTC GCCCCTATGT TTGCCTCTCT CTACAAAGAA
CGCCAAATGA TCAAACTGCA AAGCCTGAGC CGTTTAGCTT GCCGAGCCAA CGTTGGTTTA
GCGATTGTTC CCGTGATTAT TTGCACTCTA TTCCCAGAGT TTGTGATGCG GTTTTTTGGT
GAAGAGTTTC TTGCTGCTGC GCCACTGTTA GTCGTCCTGT CTTTAGGGCA GTTAGTCAAT
GTTGCGACTG GCTCTGTAGG ATTTTTATTA CTCATGAGCG GTCACGAAAG AACCATGAAA
TACATTACAA TTTCCTCCGG CACAATCTCT ATCTGCTTGC TCATTGCGCT TTGCCAAACG
TTCGGTGTTA TTGGTGCAGC ATGGGCGATG GCAATTGGCA TGGCAATTCA GAATCTAGCA
GCGTTGTACT TTGTAAAACG TTACTTAGGC TTCTTTCCAA TAGGTTAA
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| Protein sequence | MFHTVQQKLL LMPSGKKSLL STGLKTAITR VLSALFAFLL TLIVSKTSDP STSGQFFFLF
NLVSLLAIVS QLGFDVSLVR YNAIAFNNKE TLQQSHNYKT ALYRSMAFCL LAIAVLLVGF
NLFPEQLNQT QSPMHAITLG LFCIPFLVLA QTNSRVLQAC RKVVSSLFAL QLGVSMLMVF
FVFGLDYIGQ QNINNLMTAL LLASMSVAVI SSVNWLGSGQ YQTSAFVPNK KMVASAKQVW
IGSIFTNVLQ WGSLVIAGFF ISTAELGLLA AAQRTSLLIG FVLITINFMV APMFASLYKE
RQMIKLQSLS RLACRANVGL AIVPVIICTL FPEFVMRFFG EEFLAAAPLL VVLSLGQLVN
VATGSVGFLL LMSGHERTMK YITISSGTIS ICLLIALCQT FGVIGAAWAM AIGMAIQNLA
ALYFVKRYLG FFPIG
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