| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001290 |
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| Symbol | |
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| ID | 8559602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1468191 |
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| End bp | 1469117 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646408959 |
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| Product | transcriptional regulator LysR family protein |
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| Protein accession | YP_003288438 |
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| Protein GI | 262396585 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.913137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCA AACCCCTCCC ACCTTTAAAT AGCCTCGTTG CGTTTGAAGC GTCGGCGCGG
CACTTGAGTT TTACGTTAGC CGCTGACGAG CTAAACGTGA CCCAAGGTGC CATCAGTCGC
CAAATTAGAC AATTAGAAGA ATACTTGGGC AAGGCTATGT TCACGCGAGC CAATCGAAGC
ATTAACTTAA CGCCTACAGG TCTTCAATAT TATCAAGCTG TCAGCCAATC TTTGCTCGAT
ATTGCTCAAA TCACGGGTGA AGTGAAGAAA TGGCAGGGCG AACAAAAGAT CACGGTTGCG
ACGACAAATG CAATGGCAGC CTTGTGGTTG TTGCCTAAGG TTGCTCAATT TCAAAATGAA
CATGATGACA TCGATATAAG GATATTGGCC TCAGATAATG TGTTGGACTT ACGCCGATTA
GATTGCGATA TCGCCTTGTT TTATTGTCGC ACTCCACCTG CGGAAATGGA TGTGACAACG
CTATTTTCGG AAGAAGTATT CCCTGTGTGT AGCCCGCTTT ATTTAGAGAA AATCGGCCAG
CCTAGTGAGC CAGAAGAAAT CTTCAATAAA ACGTTACTCT ATCTGGAAGA GTCTCAAAGA
GATTGGGTGA ATTGGGAGCA GTGGTTTGCG AGTGTGGGGT TGCCAAATAT TTCGCCTCGT
AATCGCATGA ACATCAATAA CTATCCAATG CTGTTACAAG CGGCAATTAA TGGTCAGGGC
ATCGCGTTAG CCTGGGGCTC ATTAGTGGAC GACTATTTAC AAAGCGGCGC TTTGGTTAGG
CCAGTCGAGC ATGTTCTTTC AACACATTCC AATTTTTCTA TGCTTGAACC TAAAAATAGA
GGTTTAATCC CAGCAAGCGT CAAACGTTTT AGAGAATGGC TTTTGCATCA GTTGCCAGAT
GAAGTAGGTG ATCGAGGCTT AGCTTAA
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| Protein sequence | MKIKPLPPLN SLVAFEASAR HLSFTLAADE LNVTQGAISR QIRQLEEYLG KAMFTRANRS
INLTPTGLQY YQAVSQSLLD IAQITGEVKK WQGEQKITVA TTNAMAALWL LPKVAQFQNE
HDDIDIRILA SDNVLDLRRL DCDIALFYCR TPPAEMDVTT LFSEEVFPVC SPLYLEKIGQ
PSEPEEIFNK TLLYLEESQR DWVNWEQWFA SVGLPNISPR NRMNINNYPM LLQAAINGQG
IALAWGSLVD DYLQSGALVR PVEHVLSTHS NFSMLEPKNR GLIPASVKRF REWLLHQLPD
EVGDRGLA
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