| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001284 |
|---|
| Symbol | |
|---|
| ID | 8559596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 1459702 |
|---|
| End bp | 1461807 |
|---|
| Gene Length | 2106 bp |
|---|
| Protein Length | 701 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 646408953 |
|---|
| Product | putative iron(III) compound receptor |
|---|
| Protein accession | YP_003288432 |
|---|
| Protein GI | 262396579 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor
[TIGR03304] outer membrane insertion C-terminal signal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000165675 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAGA ATAACTCACT AACCATCGCG ATCCGTAACG CGTTGGTCTG TGCTTTGGCA
CCAACAGCAG CAGTGGTTGC ATTCACAGCA CAAGCTCAAG AAGACGTTGT ACAAGATGAC
ATTATTGCAA TGGAGACCAT TACGGTCACC GCGCAAGCAC TTAAAGTAGA AACCCCTGCG
GCAGAAACGC CGCGCAGCGT TTCTATTATC TCTGAAGACG AGCTTCGCGT TCGTGCACCG
CAAAAGTTGG ACGAAGCATT ACGCTACACA TCTGGCGTAA CCGCTCAGCC TTATGGCGCA
GACAACGACA CTGATTGGTT CAAAGTTCGT GGATTTGATG CAGCGACTTA CCTAAACGGC
AACCGCCTAT TCCGCGATGG TTACTACACA TGGTTGGTCG AACCTTACGG CCTAGAAAGT
GTGGAAGTGG TTAAAGGCCC ATCAGCTATT CTGTTTGGTG AATCGGCACC AGGCGGTATC
GTGAATGCTG TACAGAAAAA ACCAACGTTT ACGCCTCAAG GCGAAGTAAA AGTCGAAGTA
GGCAACAACC AACACCAGTC TGTAGGTTTT GACATTGCTG ATGAAGCAAA CGACGCTGGC
ACAATCCGCT ACCGTTTGGT TGGCCTGATG ACAAGCCAAG ATGGCGAACT GGACGGCACT
AACAACGAGC GTTTTTATCT AGCGCCAAGT GTCGAGTTCG ACATTTCTGA CCGTACAATG
CTGACCGTTT TGGCTACTTA CCTTCGTGAT GACGGTGTGC CAACCAACCC ATTCTTCCCA
GCAGCAGGAA CTTTGATTGG TTCTAACTTT GGCAAAATCG ATCCTTCGAC TAACCTTGGT
CAGCCAAACT ACGATAAATA CGAACGCACG CAGTTCTCTC TAGGTTACTT GCTAGAGCAC
GACATCAATG ACACGTGGTC ATTCTCTCAA AACCTCAACT ACGGCTCCAA TGAGTTGTAC
TTGCGCAGCT CTTACGCATT CTCAAACAAC GATCCTGCAA AAGAAGAATT AGCGCAAGGC
ATCGTATTCC GTGACGGCAA AAACCAGAGC ATCACATTCG ACAATAACGC TGTCGGCAAC
TGGATGACAG ACAACGCAGA GCACACGGTG CTTGTCGGTA TGGATCTGCA ATTCCACAAA
ACCGATGGCG ACGAGCAGGA CAACTACGCG TTTGGCACCA TCAACCCGTG GAACCCAGTT
TACGGCAACT TCACCCCTCT TGATCCTGCC AACAACGTGA AACGTGAGAT TGAGAAATCT
CAAGCAAGTC TCTATTCGCA ATACCAATTG AAACTGCATG AACAGTGGAT TGGTAACGTG
GGTGCTCGTT ACGACTGGGT GAAAACAGAA AACTCTGGCA AAGGCGCTAC CGTTGATCAA
AGTGAATCTC GTGATGATGG TCAGCTCTCT CTAAGTGCGG GTGTGATGTA CCTTGCAAAC
AATGGCCTGT CACCTTACGC AAACTACTCT CAGTCGTTTG AAGTGATCAG CACCATTGAT
GCGGCAACCA ATGAGCTATA CAAACCGCTG GAAGGCGAGC AAGTAGAAGT GGGTGTGAAG
TATGAGCCAA GCTTTATGGA TGGCTTTATC AACCTTGCAT GGTTCGACAT CACGCAAAAG
AACGCGTTGG TGACCAACCC ATCAACATGG ATTGCGACAC AAACAGGTGA AGTGACATCT
CAAGGTATTG AGCTAGAAAG CACGGCGCAG CTAACCGACG ATCTAAAACT GATGGCAAGC
TACACCTACA CTAAAGCGAA AACAGATGAG AGTTTTGGCC AAGGTAAAAA ACAAGCCGCA
CTTATTCCTG AACACCAAGC TTCAGCATGG GTAGACTACA GCGCCTACAG CCTGATTCCA
GGCCTCAATA TCGGTACTGG TGTGCGCTAC GTAGGTGAAT CAAAAGATAA CCCTAAGAGC
TCGAACCTAA CTGTTCCTTC AGTGACTCTT TGGGATGCGT CAATTACTTA CGACATCACT
TCACAGTGGC AAGCACAGCT AAACGTGAAC AACATTCTGG ATAAAGAGTT TGTTTCAGGT
TGCGATTACT GGTGTTACTA CGGCCAGTCT CGCTCTGTCA TGCTAAACGC AAACTACCGC
TGGTAA
|
|---|
| Protein sequence | MTKNNSLTIA IRNALVCALA PTAAVVAFTA QAQEDVVQDD IIAMETITVT AQALKVETPA
AETPRSVSII SEDELRVRAP QKLDEALRYT SGVTAQPYGA DNDTDWFKVR GFDAATYLNG
NRLFRDGYYT WLVEPYGLES VEVVKGPSAI LFGESAPGGI VNAVQKKPTF TPQGEVKVEV
GNNQHQSVGF DIADEANDAG TIRYRLVGLM TSQDGELDGT NNERFYLAPS VEFDISDRTM
LTVLATYLRD DGVPTNPFFP AAGTLIGSNF GKIDPSTNLG QPNYDKYERT QFSLGYLLEH
DINDTWSFSQ NLNYGSNELY LRSSYAFSNN DPAKEELAQG IVFRDGKNQS ITFDNNAVGN
WMTDNAEHTV LVGMDLQFHK TDGDEQDNYA FGTINPWNPV YGNFTPLDPA NNVKREIEKS
QASLYSQYQL KLHEQWIGNV GARYDWVKTE NSGKGATVDQ SESRDDGQLS LSAGVMYLAN
NGLSPYANYS QSFEVISTID AATNELYKPL EGEQVEVGVK YEPSFMDGFI NLAWFDITQK
NALVTNPSTW IATQTGEVTS QGIELESTAQ LTDDLKLMAS YTYTKAKTDE SFGQGKKQAA
LIPEHQASAW VDYSAYSLIP GLNIGTGVRY VGESKDNPKS SNLTVPSVTL WDASITYDIT
SQWQAQLNVN NILDKEFVSG CDYWCYYGQS RSVMLNANYR W
|
|---|
| |