| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001182 |
|---|
| Symbol | |
|---|
| ID | 8559495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 1346662 |
|---|
| End bp | 1347480 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 646408853 |
|---|
| Product | putative flagellar motor switch protein |
|---|
| Protein accession | YP_003288332 |
|---|
| Protein GI | 262396479 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1868] Flagellar motor switch protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATA GAGTTAGCGA GCCTATTTCT GATATTCAAC TACTTGATGT AGAATTATTA
GGCAAACCTA TTCATATCAT TCGTGAAAAG CTTGAAGGCT TGATTTCAGA GTCTTGTTCC
AGCCTTACGA TTGAATTACA AAATTGGCTC AGTACGAGTA AAGTGGAAGC TAGCTTAACC
TCTGTAGACT TGCATCGCTT TACACCAATA AAAATGGATA AAGACCAAAC GTCAACCTAT
CAACACCAAG AGGGCGGCAT GGTATTTGTT CATGGAGATT CTCACACGTT AATAAAACTG
GCAGATCGGT TCTATGGCGC CAGCACTGAG CGTTCAGCAA CAACACTGAC AGCAAGTGAC
CTCCGCTTAC AAGAACGAAT CAGTCGTATC ATTATTGGTT GGCTTGCACC AGGTGAGATG
TGGGAAATGG GTGAGTACGA AGCGCCCCGA GGGATTGGAA TTAACGTGCA ATTAAACATC
GCGTTTGACG ATCACCAAGG CTCAATTCAT CTCAAACTAG ATAGCCACCT TATTCAAACA
CTGATCGAGC AGCTTGAACT GCAGCCCGAT ACGGATTTGT ACCAACCATT CTGTCGCTCT
TTAGAGACAA CGCCTGTTCG ACTGAATGTT GTTTTAAGTA AAAAGAAGAT GCCGTTGAGC
GACGTTGTTG GCTTACAACC TAACGATATT TTACCAATTG AGCTTCTTAA TACGGTTCCA
GTCAGCATTG GTAACCAATC TTTATTTACA GGTCGTATTG CTGAGCAAGA CGGCCAACTT
GTTTTGATCT TTAACCCTGA TAAGGAACCG CAGCGATGA
|
|---|
| Protein sequence | MENRVSEPIS DIQLLDVELL GKPIHIIREK LEGLISESCS SLTIELQNWL STSKVEASLT
SVDLHRFTPI KMDKDQTSTY QHQEGGMVFV HGDSHTLIKL ADRFYGASTE RSATTLTASD
LRLQERISRI IIGWLAPGEM WEMGEYEAPR GIGINVQLNI AFDDHQGSIH LKLDSHLIQT
LIEQLELQPD TDLYQPFCRS LETTPVRLNV VLSKKKMPLS DVVGLQPNDI LPIELLNTVP
VSIGNQSLFT GRIAEQDGQL VLIFNPDKEP QR
|
|---|
| |