Gene VEA_001160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001160 
Symbol 
ID8559473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand- 
Start bp1328132 
End bp1328677 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content46% 
IMG OID646408831 
Producttranscriptional regulator 
Protein accessionYP_003288310 
Protein GI262396457 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA AGAAACAGTT ATTGATCGAC ACCGCTTTGT CGCTGTTTTA CAAACAGGGC 
ATCAACTCCA TTGGCATCAA TGAAGTCCTT AAAGTATCTG GCGTGGCTAA ACGCACGCTG 
TACAGCCATT TTGAAAGCAA AGAAGCGCTC ATCCTCGCCG CACTAGAACA ACGCCACCAA 
ATCTTCATGG CGTGGCTAGA GGAGAAACTA TCACCAACAC AATCGAGCAC AGACGTGATC 
GACCAGTTGT TTACCGCGCT TAACGGCTGG TTTCATGGTT CTGAGGAAAA ATTGGGCGAA 
TTTCGCGGCT GTTTCTTCAT CAACACGTCC GCCGAATTCA GTGACGACAG CAGCGAGCTC 
GCAACGTATT GCCGCCACCA TAAACAACAG GTTCGAGAGC TAATTCAACG CTATCTCAAA 
TCAGACAACA CATCATTACT CGATGCCATT TGCATCATGA AAGAAGGTGC CATTACCACC 
GCTTACATGA CAAAAGAGTA CGACGACGTC ACAAAGAAAT GCGTGGAAAT TTTGCGCAAA 
CTGTAA
 
Protein sequence
MNKKKQLLID TALSLFYKQG INSIGINEVL KVSGVAKRTL YSHFESKEAL ILAALEQRHQ 
IFMAWLEEKL SPTQSSTDVI DQLFTALNGW FHGSEEKLGE FRGCFFINTS AEFSDDSSEL 
ATYCRHHKQQ VRELIQRYLK SDNTSLLDAI CIMKEGAITT AYMTKEYDDV TKKCVEILRK 
L