| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001156 |
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| Symbol | |
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| ID | 8559469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1322812 |
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| End bp | 1325235 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646408827 |
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| Product | pyruvate formate-lyase |
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| Protein accession | YP_003288306 |
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| Protein GI | 262396453 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1882] Pyruvate-formate lyase |
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| TIGRFAM ID | [TIGR01774] pyruvate formate-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.124703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTAC ATACCCTTCC TGAGCGGATC AAAGCGCACA AATCTGCACT GGTCAACATC
GTAACGCCGC CTATCTGTAC TGAGCGCGCA GAGGCTTACA CTCGGGCGTA TCAGGCAAAT
GAAGACAAAC CTGTGATTGT GCAACGAGCG TTGGCGTTAC AAGAGCACTT AAGCACTCGT
ACCATTTGGA TTAAGCACGA CGAGCTGATT GTCGGTAACC AAGCGAGCAA AGTACGCGCT
GCGCCGATCT TCCCTGAATA CACGGTGCGT TGGATTGAAG CGGAAATCGA CGAACTGGCC
GACCGACCTG GGGCTGGTTT TGCGGTAAGT GAAGAAGACA AACAAAGCAT TCACGCCATT
ACGCCATACT GGCGCGGTAA AACGGTTCAA GATCGCTGCT ATGGACTCTT TACCGACGAG
CAGCAAGAGA TCTTAGCCAG CACCATCATT AAAGCCGAAG GCAACATGAC TTCGGGCGAC
GCGCACCTTG CGGTGGATAA CGAAAAAATC CTGAAAGTCG GTATGAACGG TCTGCTGGAT
GAGGTTCGTC AGCATCGCGC TAATAACGAC GTGTCGACGT ATGAAGGGTT GAAGAAAGAG
CAGTTTTATA AGTCCGTCGA AATTGTCTTG CTTGCGATTC AGGAGCACAT CGTAAGTTAC
GCCGATCTCG CTCTGGAAAT GGCACAAAAC GAAACTCGAC CAGAGAGGAA AGCGGAACTG
GAGACAATCG CAGAAAACTG TCGTCATGTG GCTTTCCATG CGCCAACCAA CTTCTGGCAA
GCTCTGCAAC TGAGCTATTT TGTGCAGTTG ATGTTGCAAA TTGAATCGAA TGGCCACTCT
GTTTCATTCG GTCGGATGGA CCAGTTCCTA AACGACTACT ATGTGCGTGA TCTTGAAAGT
GGTGCGATGA ACAAAGCGTT CGCCCTTGAG CTATTGCAAA GCTGTTGGTT GAAATTGCTT
GAAGTAAACA AGATTCGCTC TGGTGCGCAC TCAAAAGCAT CAGCAGGTTC TCCTCTGTAT
CAAAATGTCT GTATCGGTGG CCAAAAGCTG AATGAGAATG GAGAACCTGA AGATGCCGTA
AATCCGCTAT CTTGGGCGAT TTTAGAGTCT TGTGGTCAGC TACGTTCCAC ACAACCGAAC
TTGAGTGTTC GCTATCATGA AGGTCTGAAT CAAGAGTTCT TGATGGGCTG TATTGAAGTG
ATCAAATGTG GATTCGGTAT GCCTGCATTC AACAACGATG AAATTGTCAT TCCAGAGTTC
ATCAAGCTTG GCGTTGAGAA AGAAGACGCT TACAACTATG CGTCTATTGG CTGTATTGAA
ACCGCTGTTC CAGGCAAATG GGGTTACCGT TGCACGGGTA TGAGCTTCAT TAACTTTGCG
CGTATTTTGC TGGCGGCGCT TAACGAAGGT GTGGATGCAA CCACGGGCAA AGCCTTCTTG
CCGCATGATA AGTCGTTGGC AAAAGGCAAC TTCGAGAGTT TTGATCAAGT CACCGCTTCT
TGGGCGGAGC AAATTCGCTA CTACACACGT AAATCGATAG AGATCGATAC TGTAGTCGAC
AGCGTGCTTG AGCAGCAAGC GCAAGATATT TTCTGCTCAT CGCTGGTGGA TGACTGTTTG
GCGCGTGGTA AAACAGTAAA AGAAGGCGGA GCGAAATACG ATTGGGTATC TGGCCTGCAA
GTGGGTATCG CCAATTTGGG TAACAGTTTG GCGGCGATCA AACATTTGGT GTTTGAAGAA
GCACAAATCA GCCAAACGGA ATTGGCAAAA GCATTAGAAG AAGACTTCGA TGGTATTGAG
AACGAACAAC TTCGCCAACG CTTAATCAAC TTCGCGCCAA AATACGGCAA TGACGACGAT
TATGTCGACC AACTGCTGGC CGATGCTTAC CAAGTTTATA TCGATGAGTT GGCGCAATTT
GTCAACACAC GTCATGGGCG CGGACCAATT GGTGGTGGCT ACTACGCGGG AACATCGAGC
ATCTCTGCCA ACGTGCCATT TGGCGCATCC ACGATGGCAA CACCAGATGG TCGAAAAGCG
AAAACGCCAC TGGCGGAAGG CGCAAGTCCA GCATCGGGCT CTGACCGTTT GGGACCAACG
GCTGTGTACA ACTCAGTCGG TAAAATTCAA GCCAATAAAA TCTTGGGTGG TGTGCTGCTT
AACCAGAAGT TAAGCCCAGC GGCTGTCGCT TCAGAAGGAG ATAAGCTCAA GCTTTCAATG
CTGATTCGTA CCTTCTTTAA TCACCACAAA GGTTGGCACG TGCAGTACAA CATCGTCTCT
CGTAAAACCT TGCTGGCAGC GAAGAAGAAC CCTGAGCAAT ATCGTGACCT TGTCGTACGA
GTCGCGGGCT ATTCAGCTTT CTTTACCGCG CTATCACCAG ACGCGCAGGA TGACATCATC
GCTCGTACCG AACACGAGTT GTGA
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| Protein sequence | MDLHTLPERI KAHKSALVNI VTPPICTERA EAYTRAYQAN EDKPVIVQRA LALQEHLSTR
TIWIKHDELI VGNQASKVRA APIFPEYTVR WIEAEIDELA DRPGAGFAVS EEDKQSIHAI
TPYWRGKTVQ DRCYGLFTDE QQEILASTII KAEGNMTSGD AHLAVDNEKI LKVGMNGLLD
EVRQHRANND VSTYEGLKKE QFYKSVEIVL LAIQEHIVSY ADLALEMAQN ETRPERKAEL
ETIAENCRHV AFHAPTNFWQ ALQLSYFVQL MLQIESNGHS VSFGRMDQFL NDYYVRDLES
GAMNKAFALE LLQSCWLKLL EVNKIRSGAH SKASAGSPLY QNVCIGGQKL NENGEPEDAV
NPLSWAILES CGQLRSTQPN LSVRYHEGLN QEFLMGCIEV IKCGFGMPAF NNDEIVIPEF
IKLGVEKEDA YNYASIGCIE TAVPGKWGYR CTGMSFINFA RILLAALNEG VDATTGKAFL
PHDKSLAKGN FESFDQVTAS WAEQIRYYTR KSIEIDTVVD SVLEQQAQDI FCSSLVDDCL
ARGKTVKEGG AKYDWVSGLQ VGIANLGNSL AAIKHLVFEE AQISQTELAK ALEEDFDGIE
NEQLRQRLIN FAPKYGNDDD YVDQLLADAY QVYIDELAQF VNTRHGRGPI GGGYYAGTSS
ISANVPFGAS TMATPDGRKA KTPLAEGASP ASGSDRLGPT AVYNSVGKIQ ANKILGGVLL
NQKLSPAAVA SEGDKLKLSM LIRTFFNHHK GWHVQYNIVS RKTLLAAKKN PEQYRDLVVR
VAGYSAFFTA LSPDAQDDII ARTEHEL
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