| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001146 |
|---|
| Symbol | |
|---|
| ID | 8559459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 1313332 |
|---|
| End bp | 1315506 |
|---|
| Gene Length | 2175 bp |
|---|
| Protein Length | 724 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 646408817 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003288296 |
|---|
| Protein GI | 262396443 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1289] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.913629 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACA AAATAAAATT CGCTATTAAA GTATCGCTTA GCCTGACTCT GGCTTATCTA
ATCCCGTTTG CCATGGGTTG GCCGCAAGCA TCGACGGCCG CAACCACAGT GATGCTGATT
GCATCCACAG GCAGTCGTCG TGAATCCCTC GCCAAAGGTA CCTTACGTGT GTTCGGTACG
TTGGTTGGCG CCGTCGTTGG CTTGTTACTG GTGGGATTAT TTGCTCAAGA CCGCTTGCTG
TACATGCTGA GCGTGTCGGT TGTGGTCTCT TTCATTTTTT ACTTCCGTAA TGCCTACCAA
AAAGATCCAA CGCTACTCAT GCTGACCGGC GTCATGACGC TGATGATGTC CAATGGCGGT
GACGCAGAAG GTGCGTTTCT TTATGGCGTT GACCGCGCTT ATATGACGGT GTTTGGGGTG
GTGGTTTACA CACTCGTGGG GACTTTCTTA TTCCCGACCA AAACAGAACA AAACCTAAGA
CAACTCATCG AACAACTCAA CCAAGCACAA CGCGCGCTGT TCACCGCTGT CTTGCAAAAT
TTCGAGCAAA AATCGGCAGG GCAAGTTTCT CCTCAAGAAG AGGGAGTCGA AAATCCAGAA
GCTGAAGAGC CACAACCTAG CGTGGATTCT CTTATCGAAC AGATGTTTGC CGCCCAAAAT
GCGCTCGAAC AGCGTTTTGC CACAGTCAGT GTGGAATGCA GCGACGTGTC GGCCTACATG
AAAGAGTGGC GCTTGGCGGT TCATTTGAAC AAGCAAGTAA CGCAACAATT GACCGTCGCG
GCGCACAGCC ACTTTAGCCA CCAGCAAGAC CGTGAAAGCA TCAGCAACTT TGATCAAGCC
GTTGCGGAAA TTGACGCGCT ATTTGATACC TGCCAACAAG TCTGGGACGA AAAAGAGCCC
GCTTTTCGTG CTCAAGAGTT CAAAGTCGAA TACAACCAGG CGTTGCTTGA AGACGCGGCG
CACCTAGAGA AAGGCTCTGC GCTTATGCTG GGGCACCTCT TGGGGCTCAT GCATCAAAAC
TTGTCGCGTT TAGCGGAGAG CATTAGCTGC ATTGACTCTG TGACGAACAA TGTCTCCTTT
GACGTGCCGC TGCCGAAACC GAAAGGCAAG TTTCTATGGT GGGACGCAGA AAACTTTAAA
ACCGCGGTCA AAACCTTTGT CACTTATTGG GTTGCAGGAC TGATTTGGAT TTATTTCAAT
CCACCAGGCG GCTACTCGTT CGTGGTCTTC TCGACCATGT TTATGTCTTT GCTGTCGTTC
GTGCCTGTGC ACCCGATTTT GTTGCTTGTG CTGTTCACTT TCGGCTTTTT GTTCGCGGTG
CCTTCTTACG TCTTCATTCT TCCCCAATTG GATCTCGGGT TAGAGCTTGG CCTATTCATC
TTTATCTACA CTTTTATCGG CTTTTATCTG TTCAACGGGC CAGTGACGAT TTTCTACATG
GTGGGCTTGT TTGTTCTCGG TTTAGACAAC AACATGTTCT ATCACTTCGG GATCCTCATG
ACGATCATGC TGTTGTTCTA CATGGTGGTG TTCATGATTA TTTTCGCGCA CTACTTCCCG
TTTAGCTCAC GACCAGAACA CCTCTTTTTG ACCATAAAAG AACGCTACTT CCGACATACC
CGAGAGCTGT TCACTACCTA TCAACAGCAG TCTAGCTCGG TTATTACGCT GCTCAAACGG
GCCTTGCACT TGGTGACGCT CAATGTCTCA TCGAAAAAGC TCAAAGTCTG GGGTTCGAAA
ATCAACCACA AACACTTTGA CAAAACCACG CCAGAAGCGA TTGGCGAGTT TAGCAAAGCG
TGTGATGTAC TCAGTAGTCA TATCAACATC TTAATGGCCG CCGAGAAAAA GTTGCTGACC
AATCCGTTGA TTACTCAACT TCGCCAACAA CACCGCGATT CCATCATTCC TTTGATGGCG
GGCGCTTTAG CCAGCCATCA AGCAACACAA GAACTCGATT CCGTATTCGA CCAATACAGT
CAGGATTACC AAACATTCGA AGATAAACTG GAAGATTTTT TTAGTGAGTT GGATTTATCT
GACTACGCTT ATTCTGAGAT AGCCGGTTTT TATATCTTGC TGAATTTAAA ACGGAACGTG
TTCGAAGCAA TCAAGCATTG CAAGCAAACC TACGAGGATA TCGATTGGGT GAACTTACAA
CAGAAGCGTT TTTAA
|
|---|
| Protein sequence | MNDKIKFAIK VSLSLTLAYL IPFAMGWPQA STAATTVMLI ASTGSRRESL AKGTLRVFGT
LVGAVVGLLL VGLFAQDRLL YMLSVSVVVS FIFYFRNAYQ KDPTLLMLTG VMTLMMSNGG
DAEGAFLYGV DRAYMTVFGV VVYTLVGTFL FPTKTEQNLR QLIEQLNQAQ RALFTAVLQN
FEQKSAGQVS PQEEGVENPE AEEPQPSVDS LIEQMFAAQN ALEQRFATVS VECSDVSAYM
KEWRLAVHLN KQVTQQLTVA AHSHFSHQQD RESISNFDQA VAEIDALFDT CQQVWDEKEP
AFRAQEFKVE YNQALLEDAA HLEKGSALML GHLLGLMHQN LSRLAESISC IDSVTNNVSF
DVPLPKPKGK FLWWDAENFK TAVKTFVTYW VAGLIWIYFN PPGGYSFVVF STMFMSLLSF
VPVHPILLLV LFTFGFLFAV PSYVFILPQL DLGLELGLFI FIYTFIGFYL FNGPVTIFYM
VGLFVLGLDN NMFYHFGILM TIMLLFYMVV FMIIFAHYFP FSSRPEHLFL TIKERYFRHT
RELFTTYQQQ SSSVITLLKR ALHLVTLNVS SKKLKVWGSK INHKHFDKTT PEAIGEFSKA
CDVLSSHINI LMAAEKKLLT NPLITQLRQQ HRDSIIPLMA GALASHQATQ ELDSVFDQYS
QDYQTFEDKL EDFFSELDLS DYAYSEIAGF YILLNLKRNV FEAIKHCKQT YEDIDWVNLQ
QKRF
|
|---|
| |