Gene VEA_001143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001143 
Symbol 
ID8559456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1310572 
End bp1311462 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content48% 
IMG OID646408814 
Productfusaric acid resistance protein fusE 
Protein accessionYP_003288293 
Protein GI262396440 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC TATTCGTAAT CGCACTCAAT CTTGTCATTC TTGGTGGCGC AGCTTGGCTC 
GGCTATCAAA AATTTGAAGA GTATTTTAAT AACCCTTGGA CACGCGACGG CCAAGTGCGC
GCGAACGTCA TCAAAGTAGC TCCTCGTGTA TCAGGCCCAA TTGTAAATGT CGCGGTGCAA
GACAACCAAG AAGTGAAAAC AGGCGATTTA CTGTTTGAAA TCGACCCTGC GACTTACGAA
GTTGCTTTGT CTCAAGCCGA AGTGGCACTA GAGCGCGCCA TTGTTAGCTC TCGCGGTAAA
AAAATCGAAT ACGACCGCCT TAAAGATATT CGCGCGAAAG ACCGCGGCGC AGTTTCTCAC
AAGGATCTGA TTCGTCGTGA AATCGCTTAC GAAGAATCGC TACTGCAAAT CAAATCTGCA
GAAGAGCAAT TAAAGTCAGC GCGCCTTAAC CTCAGCTTTA CCAAAGTTTA TGCGACCGTC
GATGGTTTTG TGTCTAACCT CGATATTCGA AACGGTACGC AAGCGGTCGC AAACCAGCCA
CTGCTGGCGC TGATCGACAA GAACAGTTTC TGGGTGTTTG GTTTCTTCCG TGAAAACCAA
CTCGCGCAAA TCGAACCTGG CAGCCAAGCA CGTGTCACTT TGATGTCTCA CCCAGACACA
CCAATTGACG CAACGGTTGA CTCTATCGGT TGGGGTATTG CGCCGAAAGA CGGCACGGTC
GGCTACAACC TTCTTCCAAA CGTGAACCCT GTTTTTCAGT GGATTCGCTT GGCACAACGT
ATTCCGGTGC GAATCTCAAT CCAAGAACTT CCAGAAGATG TTGATCTTCG ATTCGGGCTT
TCTGCGTCCA TCATGGTGAT GAAAGATTCA TCGGCAGAAA ATGAACAGTA A
 
Protein sequence
MKKLFVIALN LVILGGAAWL GYQKFEEYFN NPWTRDGQVR ANVIKVAPRV SGPIVNVAVQ 
DNQEVKTGDL LFEIDPATYE VALSQAEVAL ERAIVSSRGK KIEYDRLKDI RAKDRGAVSH
KDLIRREIAY EESLLQIKSA EEQLKSARLN LSFTKVYATV DGFVSNLDIR NGTQAVANQP
LLALIDKNSF WVFGFFRENQ LAQIEPGSQA RVTLMSHPDT PIDATVDSIG WGIAPKDGTV
GYNLLPNVNP VFQWIRLAQR IPVRISIQEL PEDVDLRFGL SASIMVMKDS SAENEQ