| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001126 |
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| Symbol | |
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| ID | 8559439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1292179 |
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| End bp | 1293660 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646408797 |
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| Product | deoxyribodipyrimidine photolyase/cryptochrome family protein |
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| Protein accession | YP_003288276 |
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| Protein GI | 262396423 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00185581 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACAA TCAATGTCGT GTGGTTAAAG CGAGATTTAA GACTGACTGA CCACCAGCCC
TTAACACAAG CATTGTCGTC AAAGCACCCA ACGGTACTTT TATATATTGT TGAACCGTTG
CTGTTAAACA ACCCTCACTA TTCTGAGCGT CACTGGCGAT TTGTTTGGCA ATCATTGCAA
GACATGAATG AGACGCTCAA AGCCTATGGA CACCGCATCA CGGTTCTGTT TGGCGATGCC
TTAGCATGTT TTCAATCAAT TCAAATGCAA TATCAAATCA ACGCTGTGTT TTCTCATCAG
GAAATAGGGC TCAACTGCAC CTTTGAGCGC GATAAGCAAA TTGCCGACTG GCTGCATGAG
CAGAACATCA CGTGGTTTGA GTTCGAGCAC GGTGCTGTTA TTAGAGGAGC AAAAGACCGG
CAGGGTTGGG ACAAACATTG GGATTTGGTC ATGAGATCCT CCATAAGCCC TCTTGATCTG
CAGACCAACT TGTTGCATTC ATTGGATGCA GAATCACTCG GCTGCGCGTT TTCGCCACCT
TCATCCTGGC TATCAAAATG CAAAGGAATG CAAACGGGAG GAAGCCAACT CGCTTGGAAA
ACACTGGAGG ACTTTTTCAA TCGTCGAGGT CGTGATTACT ATCGAAGCAT TTCTAGTCCC
ACAGCCTCAC GTACAGCCTG TACTCGCCTT TCTCCATACC TCGCTTGGGG TAATATATCC
TTGCGTGAAG TTTATCAGTA CCTATTGAAA CACTGGCAAG TTGTTGGGTT TCGTCGCAGC
TTAATTGCGT TGTCTTCACG GCTGCATTGG CACTGCCATT TCATACAGAA ATTCGAGTCG
GAATACGACA TGGAGTTTTA CTGTGTTAAC CGGGCTTACG AATCGTTGAT TAAACAAAGT
AGCACTTTCG ATGAAGAAAA GTTAGCAGCA TGGAAATCTG GATATACTGG CATACCTTTG
ATCGATGCCT GTATGCGCTG TTTGCATCAG ACTGGCTATA TAAACTTTCG CATGCGTGCC
ATGCTGGTTA GTTTTCTCAC TCATCACATG AACATGGATT GGCGAACTGG CGTGACGCAT
TTAGCGCAAC TATTCCTCGA CTTTGAGCCT GGTATTCATT ACCCACAATT CCAAATGCAA
GCCGGGGTAA CTGGGACCAA TACAATCCGG ATTTACAACC CGGTTAAGCA AGCCCAAGAA
CATGACCCTG ATGGCGCGTT CATCTATAAA TGGGTGCCTG AATTGCAAAT GGTCCCCACC
CCACTATTGT TCGAGCCCTG GACAATGACA CAGATGGAAA CCGTCATGTA CCACTTGAAA
CCGGATAGCC GTTACCTAGC GCCTATTGTC GACCTAAATA GCGCAGCTAA AGACGCAAGG
GAGCGTCTAT GGGCATGGCG GAAACGGGCC GATGTAAAAC AAGAAGGCAA ACGGATTTTA
ACGCGACACG TGAGGCCATC GAAAGAAAGC AGGGCTCGTT GA
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| Protein sequence | MQTINVVWLK RDLRLTDHQP LTQALSSKHP TVLLYIVEPL LLNNPHYSER HWRFVWQSLQ
DMNETLKAYG HRITVLFGDA LACFQSIQMQ YQINAVFSHQ EIGLNCTFER DKQIADWLHE
QNITWFEFEH GAVIRGAKDR QGWDKHWDLV MRSSISPLDL QTNLLHSLDA ESLGCAFSPP
SSWLSKCKGM QTGGSQLAWK TLEDFFNRRG RDYYRSISSP TASRTACTRL SPYLAWGNIS
LREVYQYLLK HWQVVGFRRS LIALSSRLHW HCHFIQKFES EYDMEFYCVN RAYESLIKQS
STFDEEKLAA WKSGYTGIPL IDACMRCLHQ TGYINFRMRA MLVSFLTHHM NMDWRTGVTH
LAQLFLDFEP GIHYPQFQMQ AGVTGTNTIR IYNPVKQAQE HDPDGAFIYK WVPELQMVPT
PLLFEPWTMT QMETVMYHLK PDSRYLAPIV DLNSAAKDAR ERLWAWRKRA DVKQEGKRIL
TRHVRPSKES RAR
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