| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001083 |
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| Symbol | |
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| ID | 8559396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1232693 |
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| End bp | 1234663 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646408754 |
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| Product | glycogen debranching enzyme |
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| Protein accession | YP_003288233 |
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| Protein GI | 262396380 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACGAC TTCTCTCTCG CCCTTACCCC TTGGGTGCAA CTGTAAATAA AGAAGGTTGT
AACTTCTCTA TTCACGCACC AGGGAATAAA GACATAAAAC TCGCCCTGTT TGCAGACGAT
GGCAGTTACG CGCTTCATGA TTTACCGAAT GAATACGCTG ACATACGTCA TACTTTTATT
CCGGATATTA AGCCGGGGCA AAAATACGGT TACCTTGTCT CCCACAAGGA AGAGCCACTA
TTAATTTCTG ACCCTTACGC AAAGTCAATT GATAAAGCCC TCCACTACCA CCCTCCCTAC
TCTCCAGCCA AAAGTTTCGA TATGCCGAAG TGCATCGTTA TCGAAGATAA TTTTGACTGG
CAAGATACGG ATCATCCGCG TATACCAAGA GAAGAGATGG TGTTGTTTGA GACACACGTC
AAAGGGCTTA CCCAACTTCA CCCAGAAGTT GAGGACAAGC TGAAGGGGCG CTATTTAGGT
CTTGCATCAC CTAAAATGCT GGCCTTTTAT GAACAGCAAA ATATCAACAC GCTGCAATTG
CTACCTGTCG CTGCGTGCAT GCATGAGCCT CACCTACTAG AGATGGAAAA GGTCAACTAT
TGGGGATACA ACCCTTATCT CTTTATGGTG CCTGATCCGC GCTATGCAGA AAAAGACGCC
GTCACAGAGC TCAAAACAAC GATTCGAGAA CTGCACAAAA ACGGCATCGA AGTGATTCTC
GACGTAGTTT ACAACCACAC CGCAGAGGGG GGGGAAGGGC CTACAATTTT CAACCTGAAA
GCGCTCGATT CCCGTTTTTA CATCAAACAT GGCAACCACT TCGCAAATTA CACTGGTTGT
GGCAACACGG TCGATCTCAC CTATCAACCC GCTTTAAACC TTGTGATGGA TACATTGCGC
TACTGGGTTA GCGAATTTAA AGTCGATGGT TTTCGTTTCG ACTTAGCCGC AACGTTAGGG
CGTCAAGGCG ATGATTACAA CCCAGAAGCA GCTTTCTTTA AAGCCGTTGC GCAAGACCCT
ATTTTGCGTG AAACCAAATT GATTGCCGAA CCTTGGGATA TTGGTCCAAA TGGCTACCAA
GTGGGTAACT TTCCATTTGG TTGGAACGAA TGTAATGACA AACTGCGTGA TATTTCCCGC
AGTTTTTGGC GCGGTGATCA AGGCTATTTA AAAGAGTTTG CCACTCGATT AATGGGCTCT
CGTGATATTT ATAGTGCAGC GAACTGGCCA TACAAACTCA CGGTGAATTA CATCACGTAT
CACGATGGCT TCACACTGCA AGATTTAGTG TCTTACAAGC ACAAACACAA TGAAGCTAAT
GGCGAAGAAA ATCGCGACGG CCACGGTGAC AATCGCTCAG AAAACTACGG TGTCGAAGGC
GAGACAGAAA ATCTGATGAT CATCGCCACG CGTGAGAAGC AAAAACGCAA CCTTATTGCC
AGCTTGCTGT TTGCTTTTGG AATCCCACAC ATCCTCACTG CTGACGTGCT GTCTCACACC
CAAGGCGGTA ACAATAATGC CTATTGCCAA GATAATGAAA CCAGTTGGCT TCACTGGGGA
GAAACGGAGC GTAAGCAACA TTTCAAAACG TGGATGTCAC AAATGGTCGC CAACCGAAAT
CAATACATGG TGCCATTTAT CCGAGCTTTC AGTGGCGAAA ACCGCAATAA CAACCGTATT
TTCTGGCGCC GTACAGACGG TCGCTTAATG GAGCACGATG ATTGGAACCG TTTAAGCTCT
GTCGCACTTC ACCTTGGTAT CGGTAAAGAA GGACAAGAGC TGGTCTATCT CATCAACCAA
ACTAACGCCA CAGCGCGCTT TAAGCTCCCT AATGAGCGAA AGCAAGAATG GGTAACGATC
TGCGACACAA ACGTACGTAA CCTCAACCCA GGGCATGCTG AAGGCGAGGT TTTGCTATCA
CCTACTTCGA TGGTGATTTT GCATTACCAC CCGAAATCAG ATCAATCATA G
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| Protein sequence | MTRLLSRPYP LGATVNKEGC NFSIHAPGNK DIKLALFADD GSYALHDLPN EYADIRHTFI
PDIKPGQKYG YLVSHKEEPL LISDPYAKSI DKALHYHPPY SPAKSFDMPK CIVIEDNFDW
QDTDHPRIPR EEMVLFETHV KGLTQLHPEV EDKLKGRYLG LASPKMLAFY EQQNINTLQL
LPVAACMHEP HLLEMEKVNY WGYNPYLFMV PDPRYAEKDA VTELKTTIRE LHKNGIEVIL
DVVYNHTAEG GEGPTIFNLK ALDSRFYIKH GNHFANYTGC GNTVDLTYQP ALNLVMDTLR
YWVSEFKVDG FRFDLAATLG RQGDDYNPEA AFFKAVAQDP ILRETKLIAE PWDIGPNGYQ
VGNFPFGWNE CNDKLRDISR SFWRGDQGYL KEFATRLMGS RDIYSAANWP YKLTVNYITY
HDGFTLQDLV SYKHKHNEAN GEENRDGHGD NRSENYGVEG ETENLMIIAT REKQKRNLIA
SLLFAFGIPH ILTADVLSHT QGGNNNAYCQ DNETSWLHWG ETERKQHFKT WMSQMVANRN
QYMVPFIRAF SGENRNNNRI FWRRTDGRLM EHDDWNRLSS VALHLGIGKE GQELVYLINQ
TNATARFKLP NERKQEWVTI CDTNVRNLNP GHAEGEVLLS PTSMVILHYH PKSDQS
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